RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	PIPSL	A2A3N6	862 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	MGAT4D	A6NG13	374 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	HACD1	B0YJ81	288 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	PSTPIP1	O43586	416 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	MFAP3L	O75121	409 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	KATNA1	O75449	491 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	ZRANB2	O95218	330 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	HSD11B2	P80365	405 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	ACY1	Q03154	408 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	MSLN	Q13421	630 aa	Predicted RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	XRCC4	Q13426	336 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	DNASE1L3	Q13609	305 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	LAMB3	Q13751	1172 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	NFE2L1	Q14494	772 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	FAM151B	Q6UXP7	276 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	ZC3H18	Q86VM9	953 aa	Known RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	KATNAL2	Q8IYT4	538 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	D2HGDH	Q8N465	521 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	SLC25A41	Q8N5S1	370 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	BEND7	Q8N7W2	519 aa	Predicted RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	SIDT2	Q8NBJ9	832 aa	Known RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	GPR150	Q8NGU9	434 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	SEC14L1	Q92503	715 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	MIB2	Q96AX9	1013 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	INSM2	Q96T92	566 aa	Predicted RBP	13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	CD180	Q99467	661 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	FGF21	Q9NSA1	209 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	ANKMY1	Q9P2S6	941 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	LNPEP	Q9UIQ6	1025 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	PSMD13	Q9UNM6	376 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	PKP3	Q9Y446	797 aa		13.34	□□□□□ -0.27
RNF31-223	ENST00000560754	hCG_1818297	A0A087WSY0	165 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	OR5K3	A6NET4	321 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	OR2AG2	A6NM03	316 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	GPR39	O43194	453 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	BUD23	O43709	281 aa	Known RBP	13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	SPOP	O43791	374 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	AGT	P01019	485 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TPM1	P09493	284 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	MTHFD1	P11586	935 aa	Known RBP	13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TNNT1	P13805	278 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	PMS2	P54278	862 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TBX2	Q13207	712 aa	Predicted RBP	13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TUBB3	Q13509	450 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	SEMA5A	Q13591	1074 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	KCNAB1	Q14722	419 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	PTPRCAP	Q14761	206 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	LLGL1	Q15334	1064 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	PPP2R5E	Q16537	467 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	KAZN	Q674X7	775 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	GLT6D1	Q7Z4J2	308 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TMEM135	Q86UB9	458 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	CARF	Q8N187	725 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	OR2L2	Q8NH16	312 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	BLOC1S5	Q8TDH9	187 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	CT55	Q8WUE5	264 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	RNF31	Q96EP0	1072 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	LINC00615	Q96LM1	132 aa	Predicted RBP	13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	C19orf43	Q9BQ61	176 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	TWSG1	Q9GZX9	223 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	MLXIPL	Q9NP71	852 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	HRASLS2	Q9NWW9	162 aa		13.33	□□□□□ -0.28
RNF31-223	ENST00000560754	CCDC88C	Q9P219	2028 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	CDC14C	A4D256	554 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	C5orf60	A6NFR6	353 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	TLCD2	A6NGC4	264 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	STX7	O15400	261 aa	Known RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	SGTA	O43765	313 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	RFPL1	O75677	317 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	LCA5L	O95447	670 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	NTRK1	P04629	796 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	NR1D1	P20393	614 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	LPO	P22079	712 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	PTPN4	P29074	926 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ADRA1A	P35348	466 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	TNNT3	P45378	269 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	TAF1A	Q15573	450 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	LONRF2	Q1L5Z9	754 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	FNBP1L	Q5T0N5	605 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	CAPRIN2	Q6IMN6	1127 aa	Known RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	CERS6	Q6ZMG9	384 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ASB18	Q6ZVZ8	466 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	BBS12	Q6ZW61	710 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	TEX19	Q8NA77	164 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	IPMK	Q8NFU5	416 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	OR8K5	Q8NH50	307 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	THAP4	Q8WY91	577 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ZNF501	Q96CX3	271 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	GORASP1	Q9BQQ3	440 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ACTL8	Q9H568	366 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	KCND1	Q9NSA2	647 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	SLC24A2	Q9UI40	661 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	PLAA	Q9Y263	795 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ICE1	Q9Y2F5	2266 aa		13.32	□□□□□ -0.28
RNF31-223	ENST00000560754	ANXA9	O76027	345 aa		13.31	□□□□□ -0.28
RNF31-223	ENST00000560754	SRP72	O76094	671 aa	Known RBP	13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms