RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 WWP1Q9H0M0 922 aa10.01□□□□□ -0.81
LDLR-214ENST00000560628 ZNF768Q9H5H4 540 aaKnown RBP10.01□□□□□ -0.81
LDLR-214ENST00000560628 STARD5Q9NSY2 213 aa10.01□□□□□ -0.81
LDLR-214ENST00000560628 IMP3Q9NV31 184 aaKnown RBP10.01□□□□□ -0.81
LDLR-214ENST00000560628 GEMIN8Q9NWZ8 242 aaKnown RBP10.01□□□□□ -0.81
LDLR-214ENST00000560628 AAR2Q9Y312 384 aaKnown RBP10.01□□□□□ -0.81
LDLR-214ENST00000560628 DNMT3AQ9Y6K1 912 aaPredicted RBP10.01□□□□□ -0.81
LDLR-214ENST00000560628 RPS6KL1Q9Y6S9 549 aa10.01□□□□□ -0.81
LDLR-214ENST00000560628 KALRNO60229 2985 aa10.01□□□□□ -0.81
LDLR-214ENST00000560628 PIEZO2Q9H5I5 2752 aa10□□□□□ -0.81
LDLR-214ENST00000560628 IGHV5-51A0A0C4DH38 117 aa10□□□□□ -0.81
LDLR-214ENST00000560628 A0A0U1RQJ8 604 aa10□□□□□ -0.81
LDLR-214ENST00000560628 MGAT4DA6NG13 374 aa10□□□□□ -0.81
LDLR-214ENST00000560628 BTNL10A8MVZ5 291 aa10□□□□□ -0.81
LDLR-214ENST00000560628 TOX3O15405 576 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 SPAG6O75602 509 aa10□□□□□ -0.81
LDLR-214ENST00000560628 KIAA0754O94854 1291 aa10□□□□□ -0.81
LDLR-214ENST00000560628 DLGAP3O95886 979 aa10□□□□□ -0.81
LDLR-214ENST00000560628 PTMAP06454 111 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 MTHFD1P11586 935 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 TPH1P17752 444 aa10□□□□□ -0.81
LDLR-214ENST00000560628 F8A1P23610 371 aa10□□□□□ -0.81
LDLR-214ENST00000560628 PTPN7P35236 360 aa10□□□□□ -0.81
LDLR-214ENST00000560628 CCR10P46092 362 aa10□□□□□ -0.81
LDLR-214ENST00000560628 CAPZBP47756 277 aa10□□□□□ -0.81
LDLR-214ENST00000560628 VAV2P52735 878 aa10□□□□□ -0.81
LDLR-214ENST00000560628 POLE2P56282 527 aa10□□□□□ -0.81
LDLR-214ENST00000560628 XIAPP98170 497 aa10□□□□□ -0.81
LDLR-214ENST00000560628 MSLNQ13421 630 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 KCNAB1Q14722 419 aa10□□□□□ -0.81
LDLR-214ENST00000560628 PLCL1Q15111 1095 aa10□□□□□ -0.81
LDLR-214ENST00000560628 DEFB109BQ30KR1 87 aa10□□□□□ -0.81
LDLR-214ENST00000560628 ATP1A1-AS1Q5TC04 95 aa10□□□□□ -0.81
LDLR-214ENST00000560628 DUS1LQ6P1R4 473 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 C6orf15Q6UXA7 325 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 PRSS42Q7Z5A4 293 aa10□□□□□ -0.81
LDLR-214ENST00000560628 GAS2L3Q86XJ1 694 aa10□□□□□ -0.81
LDLR-214ENST00000560628 PTRH1Q86Y79 214 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 CFAP206Q8IYR0 622 aa10□□□□□ -0.81
LDLR-214ENST00000560628 TAB3Q8N5C8 712 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 ESX1Q8N693 406 aa10□□□□□ -0.81
LDLR-214ENST00000560628 LILRA3Q8N6C8 439 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 LRRC57Q8N9N7 239 aa10□□□□□ -0.81
LDLR-214ENST00000560628 FAM71DQ8N9W8 422 aa10□□□□□ -0.81
LDLR-214ENST00000560628 KLHL6Q8WZ60 621 aa10□□□□□ -0.81
LDLR-214ENST00000560628 DCUN1D1Q96GG9 259 aa10□□□□□ -0.81
LDLR-214ENST00000560628 CALR3Q96L12 384 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 C12orf66Q96MD2 445 aa10□□□□□ -0.81
LDLR-214ENST00000560628 MAP3K3Q99759 626 aa10□□□□□ -0.81
LDLR-214ENST00000560628 BAG1Q99933 345 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 TBL1YQ9BQ87 522 aa10□□□□□ -0.81
LDLR-214ENST00000560628 SLC25A18Q9H1K4 315 aa10□□□□□ -0.81
LDLR-214ENST00000560628 TRIT1Q9H3H1 467 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 SMOXQ9NWM0 555 aa10□□□□□ -0.81
LDLR-214ENST00000560628 EPHA6Q9UF33 1036 aa10□□□□□ -0.81
LDLR-214ENST00000560628 AMFRQ9UKV5 643 aa10□□□□□ -0.81
LDLR-214ENST00000560628 PACSIN2Q9UNF0 486 aaPredicted RBP10□□□□□ -0.81
LDLR-214ENST00000560628 MRPS18BQ9Y676 258 aaKnown RBP10□□□□□ -0.81
LDLR-214ENST00000560628 OR6C74A6NCV1 312 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 SGTAO43765 313 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 KATNA1O75449 491 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 METTL18O95568 372 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 CRTAMO95727 393 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 FTCDO95954 541 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 FOLR1P15328 257 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 NELFEP18615 380 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 TCN2P20062 427 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 OAS2P29728 719 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 DLSTP36957 453 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 STAT5AP42229 794 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 ARCN1P48444 511 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 CDKN1CP49918 316 aaPredicted RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 KCNC4Q03721 635 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 CDC20Q12834 499 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 KCNAB2Q13303 367 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 KRT33BQ14525 404 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 IL11RAQ14626 422 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 GSE1Q14687 1217 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 KLHL35Q6PF15 583 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 FBXO38Q6PIJ6 1188 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 CERS6Q6ZMG9 384 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 PEX26Q7Z412 305 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 SIDT2Q8NBJ9 832 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 OR2L2Q8NH16 312 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 STARD8Q92502 1023 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 STAMBPL1Q96FJ0 436 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 ZNF514Q96K75 400 aaPredicted RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 CATSPER2Q96P56 530 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 DESI2Q9BSY9 194 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 EFHD1Q9BUP0 239 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 RAB33BQ9H082 229 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 PIH1D1Q9NWS0 290 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 HRASLS2Q9NWW9 162 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 LNPEPQ9UIQ6 1025 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 CRLS1Q9UJA2 301 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 CROTQ9UKG9 612 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 ACSL5Q9ULC5 683 aa9.99□□□□□ -0.81
LDLR-214ENST00000560628 R3HDM2Q9Y2K5 976 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 GCN1Q92616 2671 aaKnown RBP9.99□□□□□ -0.81
LDLR-214ENST00000560628 HELZ2Q9BYK8 2649 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms