RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 E4F1Q66K89 784 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 FBXO38Q6PIJ6 1188 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 WASH2PQ6VEQ5 465 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CLEC17AQ6ZS10 378 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 NT5DC3Q86UY8 548 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 KMT5CQ86Y97 462 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZNF547Q8IVP9 402 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CISD2Q8N5K1 135 aaKnown RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 NIPA2Q8N8Q9 360 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CPT1BQ92523 772 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 PNPLA2Q96AD5 504 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 EID2BQ96D98 161 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 HDAC11Q96DB2 347 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 C19orf60Q96EN9 201 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 AGAP3Q96P47 875 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 CD180Q99467 661 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZNF670Q9BS34 389 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 TUBB2BQ9BVA1 445 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 TLR10Q9BXR5 811 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ILKAPQ9H0C8 392 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ISCUQ9H1K1 167 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 MAGEE1Q9HCI5 957 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 AIPL1Q9NZN9 384 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 ERRFI1Q9UJM3 462 aaPredicted RBP10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 SRPK3Q9UPE1 567 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC5A6Q9Y289 635 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 SPTBP11277 2137 aa10.25□□□□□ -0.77
CDC42BPB-207ENST00000560492 SSU72P8A0A1W2PR75 194 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 OR6C74A6NCV1 312 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 OR5K3A6NET4 321 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ANKUB1A6NFN9 424 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 OR2AG2A6NM03 316 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 C9J4A7 227 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 MEN1O00255 615 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 PMPCBO75439 489 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 POP7O75817 140 aaKnown RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 LPOP22079 712 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TNFRSF8P28908 595 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 AKT1P31749 480 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 PRKCIP41743 596 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZBTB17Q13105 803 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ATP1A4Q13733 1029 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 NFE2L1Q14494 772 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 PDK2Q15119 407 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ATP13A5Q4VNC0 1218 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ODF2Q5BJF6 829 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 PRAMEF17Q5VTA0 474 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 LYPLAL1Q5VWZ2 237 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 DUS1LQ6P1R4 473 aaKnown RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 MED25Q71SY5 747 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 DET1Q7L5Y6 550 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMC3Q7Z5M5 1100 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 RAB43Q86YS6 212 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 HPS6Q86YV9 775 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 RBMXL3Q8N7X1 1067 aaKnown RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMEM102Q8N9M5 508 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 Q8NA96 180 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TTC13Q8NBP0 860 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 OR8K5Q8NH50 307 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 BRSK1Q8TDC3 778 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 N4BP2L2Q92802 583 aaPredicted RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TCTN2Q96GX1 697 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 C12orf66Q96MD2 445 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 MLXIPLQ9NP71 852 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 ASF1BQ9NVP2 202 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 TCFL5Q9UL49 500 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 MDC1Q14676 2089 aaKnown RBP10.24□□□□□ -0.77
CDC42BPB-207ENST00000560492 GSAPA4D1B5 854 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 LRRC10BA6NIK2 292 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMEM150CB9EJG8 249 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 LDLRP01130 860 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 ALPPP05187 535 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC35G4P0C7Q5 338 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 MTHFD1P11586 935 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 POLR2CP19387 275 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 HLA-DPA1P20036 260 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 MSH3P20585 1137 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 GLRBP48167 497 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 ITGA1P56199 1179 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 SLC10A2Q12908 348 aaPredicted RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 PTCHD3Q3KNS1 767 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZRANB3Q5FWF4 1079 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 FNBP1LQ5T0N5 605 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 IZUMO3Q5VZ72 239 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 PAPD7Q5XG87 772 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 LCN10Q6JVE6 187 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 TMEM220Q6QAJ8 160 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 FAM151BQ6UXP7 276 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 APTXQ7Z2E3 356 aaKnown RBP10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 HOOK3Q86VS8 718 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 SYTL1Q8IYJ3 562 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 DSELQ8IZU8 1212 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 D2HGDHQ8N465 521 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 CLEC1AQ8NC01 280 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 SPATA22Q8NHS9 363 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 FATE1Q969F0 183 aa10.23□□□□□ -0.77
CDC42BPB-207ENST00000560492 ZNF501Q96CX3 271 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms