RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 KHDC1Q4VXA5 237 aaKnown RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 CRTC2Q53ET0 693 aaPredicted RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 FNBP1LQ5T0N5 605 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 CACHD1Q5VU97 1274 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 METRNLQ641Q3 311 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 OOSP2Q86WS3 158 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 RNF10Q8N5U6 811 aaKnown RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 LRRC57Q8N9N7 239 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 OR2L2Q8NH16 312 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 HM13Q8TCT9 377 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 STAMBPL1Q96FJ0 436 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 LINC00615Q96LM1 132 aaPredicted RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 TTC1Q99614 292 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 IMP3Q9NV31 184 aaKnown RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 SIDT1Q9NXL6 827 aaKnown RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
TPM1-223ENST00000560445 KCND3Q9UK17 655 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 TMPRSS11EQ9UL52 423 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 PCDHB3Q9Y5E6 796 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 ARL5AQ9Y689 179 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 CFAP46Q8IYW2 2715 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 PIEZO2Q9H5I5 2752 aa13.8□□□□□ -0.2
TPM1-223ENST00000560445 GRID2IPA4D2P6 1211 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 OR2AG2A6NM03 316 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 IFRD1O00458 451 aaPredicted RBP13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A9O60656 530 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 LIFP15018 202 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A6P19224 532 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A1P22309 533 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A4P22310 534 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 GFERP55789 205 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 PRKAA1Q13131 559 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 SEPT6Q14141 434 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 GSE1Q14687 1217 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 RPE65Q16518 533 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM1-223ENST00000560445 DNTTIP2Q5QJE6 756 aaKnown RBP13.79□□□□□ -0.2
TPM1-223ENST00000560445 RAD9BQ6WBX8 426 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 PPP1R3BQ86XI6 285 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 RASGRP3Q8IV61 690 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 OR8K5Q8NH50 307 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 CCDC110Q8TBZ0 833 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 EXTL1Q92935 676 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A7Q9HAW7 530 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A10Q9HAW8 530 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 UGT1A8Q9HAW9 530 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 GEMIN8Q9NWZ8 242 aaKnown RBP13.79□□□□□ -0.2
TPM1-223ENST00000560445 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
TPM1-223ENST00000560445 C17orf113A0A1B0GUU1 675 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 TLCD2A6NGC4 264 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 BUD23O43709 281 aaKnown RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 KRT86O43790 486 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 KDM1AO60341 852 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 FGF5P12034 268 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 PBLDP30039 288 aaPredicted RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 STAT5AP42229 794 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 CTSCP53634 463 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 GSDMDP57764 484 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 TBR1Q16650 682 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 TMTC4Q5T4D3 741 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 SEL1L2Q5TEA6 688 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 C6orf15Q6UXA7 325 aaPredicted RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 GAS2L3Q86XJ1 694 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 NXPE1Q8N323 547 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 SIDT2Q8NBJ9 832 aaKnown RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 ACRBPQ8NEB7 543 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 JPH3Q8WXH2 748 aaPredicted RBP13.78□□□□□ -0.2
TPM1-223ENST00000560445 KLHL6Q8WZ60 621 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 ALG3Q92685 438 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 C12orf66Q96MD2 445 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 OR6C1Q96RD1 312 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 CTRCQ99895 268 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 SLC12A9Q9BXP2 914 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 FANCEQ9HB96 536 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 OGFRQ9NZT2 677 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 FKBPLQ9UIM3 349 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 RARRES3Q9UL19 164 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
TPM1-223ENST00000560445 UBA6A0AVT1 1052 aaPredicted RBP13.77□□□□□ -0.21
TPM1-223ENST00000560445 RCCD1A6NED2 376 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 AGAP14A8MT82 685 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 NRDCO43847 1150 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 AP2A2O94973 939 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 DLGAP3O95886 979 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 NELFEP18615 380 aaKnown RBP13.77□□□□□ -0.21
TPM1-223ENST00000560445 PPARGP37231 505 aaPredicted RBP13.77□□□□□ -0.21
TPM1-223ENST00000560445 PRLHRP49683 370 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 SEPHS1P49903 392 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 ZNF140P52738 457 aaPredicted RBP13.77□□□□□ -0.21
TPM1-223ENST00000560445 RPA4Q13156 261 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 NFE2L1Q14494 772 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 CLCA4Q14CN2 919 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 SKIDA1Q1XH10 827 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 DET1Q7L5Y6 550 aa13.77□□□□□ -0.21
TPM1-223ENST00000560445 KLHDC8BQ8IXV7 354 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms