RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 GPN2Q9H9Y4 310 aaPredicted RBP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 BFARQ9NZS9 450 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 NFS1Q9Y697 457 aa20.28■□□□□ 0.84
PSEN1-225ENST00000560005 TEP1Q99973 2627 aaKnown RBP20.28■□□□□ 0.84
PSEN1-225ENST00000560005 PRSS38A1L453 326 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 ZW10O43264 779 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 ACSL3O95573 720 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 CPP00450 1065 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 FGF1P05230 155 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 CDC20Q12834 499 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 BIRC2Q13490 618 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 CYTH1Q15438 398 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 LACTB2Q53H82 288 aaPredicted RBP20.27■□□□□ 0.84
PSEN1-225ENST00000560005 FAM129CQ86XR2 697 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 FBXO36Q8NEA4 188 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 OR4D9Q8NGE8 314 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 PWWP2AQ96N64 755 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 POLR1EQ9GZS1 481 aaKnown RBP20.27■□□□□ 0.84
PSEN1-225ENST00000560005 EPB41L4BQ9H329 900 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 WDR26Q9H7D7 661 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 CARS2Q9HA77 564 aaKnown RBP20.27■□□□□ 0.84
PSEN1-225ENST00000560005 PDFQ9HBH1 243 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 NT5MQ9NPB1 228 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 OCIAD1Q9NX40 245 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 TEX264Q9Y6I9 313 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 ITPR2Q14571 2701 aa20.27■□□□□ 0.84
PSEN1-225ENST00000560005 RP1L1Q8IWN7 2480 aaPredicted RBP20.27■□□□□ 0.83
PSEN1-225ENST00000560005 PRR19A6NJB7 356 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 AGPSO00116 658 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 HLA-DQB2P05538 268 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 HOXC4P09017 264 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 THRAP10827 490 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 OAS2P29728 719 aaKnown RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 CSF2RBP32927 897 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 ELK3P41970 407 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 CD97P48960 835 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 ITKQ08881 620 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 SLC10A7Q0GE19 358 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 CDH17Q12864 832 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 RALGDSQ12967 914 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 DEFB109BQ30KR1 87 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 RALGPS1Q5JS13 557 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 DCAF12Q5T6F0 453 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 ANKS6Q68DC2 871 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 BRAT1Q6PJG6 821 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 NRROSQ86YC3 692 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 NRSN1Q8IZ57 195 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 APOBEC4Q8WW27 367 aaKnown RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 PATE1Q8WXA2 126 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 KIAA1143Q96AT1 154 aaPredicted RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 IMP4Q96G21 291 aaKnown RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 EBNA1BP2Q99848 306 aaKnown RBP20.26■□□□□ 0.83
PSEN1-225ENST00000560005 VPS37BQ9H9H4 285 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 TMEM9Q9P0T7 183 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 TAAR2Q9P1P5 351 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 FETUBQ9UGM5 382 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 PILRAQ9UKJ1 303 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 CENPEQ02224 2701 aa20.26■□□□□ 0.83
PSEN1-225ENST00000560005 EFCAB7A8K855 629 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 TRIM23P36406 574 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 GPR3P46089 330 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 ZNF844Q08AG5 666 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 KLRB1Q12918 225 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 GRM3Q14832 879 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 KRT71Q3SY84 523 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 C3orf62Q6ZUJ4 267 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 UNC5BQ8IZJ1 945 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 PELI3Q8N2H9 469 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 RIBC1Q8N443 379 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-225ENST00000560005 DNAAF3Q8N9W5 541 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 SIGLEC10Q96LC7 697 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 ZNF641Q96N77 438 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-225ENST00000560005 PSKH2Q96QS6 385 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 CINPQ9BW66 212 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-225ENST00000560005 GSDMCQ9BYG8 508 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 CASS4Q9NQ75 786 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 SAMD15Q9P1V8 674 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 PLEKHB1Q9UF11 243 aaPredicted RBP20.25■□□□□ 0.83
PSEN1-225ENST00000560005 ZC3H7BQ9UGR2 993 aaKnown RBP20.25■□□□□ 0.83
PSEN1-225ENST00000560005 TTLL3Q9Y4R7 772 aa20.25■□□□□ 0.83
PSEN1-225ENST00000560005 LOC101059948A0A1B0GTJ6 334 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 B4E171 279 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 RASGRF2O14827 1237 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 ELFN1P0C7U0 828 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 AK4P27144 223 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-225ENST00000560005 ATP5DP30049 168 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 TSPAN7P41732 249 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 MLLT10P55197 1068 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 RAB15P59190 212 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 ILF3Q12906 894 aaKnown RBP eCLIP20.24■□□□□ 0.83
PSEN1-225ENST00000560005 KLHL38Q2WGJ6 581 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 MSS51Q4VC12 460 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 AGBL2Q5U5Z8 902 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 ALG1LQ6GMV1 187 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 LIPIQ6XZB0 460 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 CYS1Q717R9 158 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 ANKMY2Q8IV38 441 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 NLGN4XQ8N0W4 816 aa20.24■□□□□ 0.83
PSEN1-225ENST00000560005 NLGN4YQ8NFZ3 816 aaPredicted RBP20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms