RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 STON1Q9Y6Q2 735 aa17.55■□□□□ 0.4
SNX1-208ENST00000559844 NPC1O15118 1278 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 SNX2O60749 519 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 CDK14O94921 469 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 SIX3O95343 332 aaPredicted RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 ANP32DO95626 131 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 RPS17P08708 135 aaKnown RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 HLA-EP13747 358 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 RECQLP46063 649 aaPredicted RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 MRPS21P82921 87 aaKnown RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 LCP2Q13094 533 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 SQLEQ14534 574 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 MAPRE2Q15555 327 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 TMEM198Q66K66 360 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 CRTC1Q6UUV9 634 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 ZSWIM9Q86XI8 627 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 GPSM1Q86YR5 675 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 CPNE9Q8IYJ1 553 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 IL17RCQ8NAC3 791 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 TMEM245Q9H330 911 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 ZDHHC6Q9H6R6 413 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 SARS2Q9NP81 518 aaKnown RBP17.54■□□□□ 0.4
SNX1-208ENST00000559844 MID1IP1Q9NPA3 183 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 NUDT4Q9NZJ9 180 aa17.54■□□□□ 0.4
SNX1-208ENST00000559844 NPIPB15A6NHN6 443 aaPredicted RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 UBDO15205 165 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 BNIP3LO60238 219 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CCNT2O60583 730 aaKnown RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 GPC4O75487 556 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 PSMG1O95456 288 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 KLF8O95600 359 aaPredicted RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 VASPP50552 380 aaPredicted RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 CDH13P55290 713 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 POLR2LP62875 67 aaKnown RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 SH3BP2P78314 561 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CLCQ05315 142 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 FZD5Q13467 585 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 C1orf146Q5VVC0 180 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CLPTM1LQ96KA5 538 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 MCCC1Q96RQ3 725 aaPredicted RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 MTG2Q9H4K7 406 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 AZIN1O14977 448 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 EPHX1P07099 455 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 TSPAN8P19075 237 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 GNAZP19086 355 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 NTSR1P30989 418 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 RGS4P49798 205 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CCNG1P51959 295 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 ACTR3P61158 418 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CHRNA6Q15825 494 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 KANK2Q63ZY3 851 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 PGM2L1Q6PCE3 622 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 DPY19L3Q6ZPD9 716 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 Q6ZVU0 165 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 TRMT11Q7Z4G4 463 aaKnown RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 DEFB107AQ8IZN7 70 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 SYNPOQ8N3V7 929 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 FRS2Q8WU20 508 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 VOPP1Q96AW1 172 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 ERLEC1Q96DZ1 483 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 C19orf60Q96EN9 201 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 CD274Q9NZQ7 290 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 PRPF19Q9UMS4 504 aaKnown RBP17.53■□□□□ 0.4
SNX1-208ENST00000559844 SIT1Q9Y3P8 196 aa17.53■□□□□ 0.4
SNX1-208ENST00000559844 GPR39O43194 453 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 MLYCDO95822 493 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 ATP4BP51164 291 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 CDC16Q13042 620 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 ENPP2Q13822 863 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 CRY1Q16526 586 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 UGT3A2Q3SY77 523 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 LRRC66Q68CR7 880 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 CLEC6AQ6EIG7 209 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 SDE2Q6IQ49 451 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 GDPD4Q6W3E5 623 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 MACC1Q6ZN28 852 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 RIPOR1Q6ZS17 1223 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.4
SNX1-208ENST00000559844 ADAMTSL2Q86TH1 951 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 TSPAN33Q86UF1 283 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 KYQ8NBH2 561 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 TRPC4APQ8TEL6 797 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 ZNF483Q8TF39 744 aaPredicted RBP17.52■□□□□ 0.4
SNX1-208ENST00000559844 ANKRD27Q96NW4 1050 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 OSBPL6Q9BZF3 934 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 STOML1Q9UBI4 398 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 SCN8AQ9UQD0 1980 aa17.52■□□□□ 0.4
SNX1-208ENST00000559844 TMEM221A6NGB7 291 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 AGAP14A8MT82 685 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 IQCF5A8MTL0 148 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 H0Y3Z8 333 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 M0R296 226 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 ADAM23O75077 832 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 NFKBIAP25963 317 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 NUDT2P50583 147 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 TBL3Q12788 808 aaKnown RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 CCDC6Q16204 474 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 HNRNPA1L2Q32P51 320 aaKnown RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 NXPE1Q8N323 547 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms