RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 LSM1O15116 133 aaKnown RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 GPR42O15529 346 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 RASAL1O95294 804 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 TRIM16O95361 564 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 GPIP06744 558 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 MRPL19P49406 292 aaKnown RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 CCL23P55773 120 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 ZXDBP98169 803 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 EMX2Q04743 252 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 RFTN2Q52LD8 501 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 AARS2Q5JTZ9 985 aaKnown RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 TTC33Q6PID6 262 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 CYP20A1Q6UW02 462 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 CRIPAKQ8N1N5 446 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 MAGEE2Q8TD90 523 aaPredicted RBP9.9□□□□□ -0.83
LRRC28-216ENST00000559819 TSPEARQ8WU66 669 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 SEPT8Q92599 483 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 MYO19Q96H55 970 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 VPS50Q96JG6 964 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 TMEM175Q9BSA9 504 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 C17orf80Q9BSJ5 609 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 FEM1AQ9BSK4 669 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 YIPF1Q9Y548 306 aa9.9□□□□□ -0.83
LRRC28-216ENST00000559819 FFAR2O15552 330 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PRAMEF1O95521 474 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 MYCP01106 439 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 INHAP05111 366 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 MYF6P23409 242 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 EEFSECP57772 596 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 TRAF3Q13114 568 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ADRM1Q16186 407 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 AP5B1Q2VPB7 878 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 SLC36A3Q495N2 470 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 SGO1Q5FBB7 561 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 GLYATQ6IB77 296 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 KIAA1841Q6NSI8 718 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 DLEU7Q6UYE1 221 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 MBOAT1Q6ZNC8 495 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 LPCAT2Q7L5N7 544 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PACRGLQ8N7B6 248 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PAF1Q8N7H5 531 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PIH1D2Q8WWB5 315 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 RNF145Q96MT1 663 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 IPPKQ9H8X2 491 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 FARSBQ9NSD9 589 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 RSL24D1Q9UHA3 163 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 SLC8A2Q9UPR5 921 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ST14Q9Y5Y6 855 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ZFC3H1O60293 1989 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 CLDN7O95471 211 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 SNAP29O95721 258 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 CD9P21926 228 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 RPL38P63173 70 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 GRIK2Q13002 908 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PRKG2Q13237 762 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PTGR1Q14914 329 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PCBP2Q15366 365 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PHKG1Q16816 387 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ARMC12Q5T9G4 340 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 TMEM214Q6NUQ4 689 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 BORAQ6PGQ7 559 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 HID1Q8IV36 788 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ADAMTS19Q8TE59 1207 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 OVCA2Q8WZ82 227 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ISG20Q96AZ6 181 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ABCG8Q9H221 673 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 ASB8Q9H765 288 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 HEBP1Q9NRV9 189 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 AFF4Q9UHB7 1163 aaKnown RBP9.89□□□□□ -0.83
LRRC28-216ENST00000559819 NEUROG3Q9Y4Z2 214 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 OR51B4Q9Y5P0 310 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 PLXNA4Q9HCM2 1894 aa9.89□□□□□ -0.83
LRRC28-216ENST00000559819 CASP8AP2Q9UKL3 1982 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ANKRD28O15084 1053 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CLOCKO15516 846 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 DFNA5O60443 496 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TRMUO75648 421 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 SLC25A14O95258 325 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 PGLSO95336 258 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 S100BP04271 92 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 PCNAP12004 261 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 SLC2A4P14672 509 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 VARSP26640 1264 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 HMOX2P30519 316 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 YAP1P46937 504 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 ALDH7A1P49419 539 aaKnown RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 CTBSQ01459 385 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 HMGCS1Q01581 520 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TMTC4Q5T4D3 741 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 MILR1Q7Z6M3 343 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TMCO2Q7Z6W1 182 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-216ENST00000559819 DEFB128Q7Z7B8 93 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 TMEM150AQ86TG1 271 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 FAM126BQ8IXS8 530 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
LRRC28-216ENST00000559819 DTWD1Q8N5C7 304 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms