RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 TRIM33Q9UPN9 1127 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ZNF148Q9UQR1 794 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 DGKBQ9Y6T7 804 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 COMMD3-BMI1R4GMX3 469 aa5.83□□□□□ -1.48
USP3-212ENST00000559276 COL12A1Q99715 3063 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SMIM31A0A1B0GVY4 71 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TTC24A2A3L6 582 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 PLD2O14939 933 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CREB3O43889 395 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PRAMEF11O60813 436 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ENTPD5O75356 428 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SKAP2O75563 359 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 CBX6O95503 412 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 IGSF6O95976 241 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PEX11BO96011 259 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MT-ND3P03897 115 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RPLP0P05388 317 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 KRT7P08729 469 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ITGB6P18564 788 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 KRT4P19013 534 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ITIH1P19827 911 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CRABP2P29373 138 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CCKBRP32239 447 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TRIM23P36406 574 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ETV5P41161 510 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RPIAP49247 311 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SUOXP51687 545 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ARSDP51689 593 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RHOAP61586 193 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 B4GALNT1Q00973 533 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SLC18A2Q05940 514 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 GPS1Q13098 491 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 BIRC2Q13490 618 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MAMLD1Q13495 774 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ITGA9Q13797 1035 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SPIDRQ14159 915 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RCN2Q14257 317 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PRKD1Q15139 912 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 PTPRRQ15256 657 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SLC1A5Q15758 541 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TAZQ16635 292 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PARP15Q460N3 678 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ZNF449Q6P9G9 518 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ENPP7Q6UWV6 458 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 LIPIQ6XZB0 460 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SPOCD1Q6ZMY3 1216 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CCDC81Q6ZN84 652 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ACAD11Q709F0 780 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RAB11FIP2Q7L804 512 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MTDHQ86UE4 582 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 ZC3H18Q86VM9 953 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 C17orf82Q86X59 251 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 NRROSQ86YC3 692 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TMEM126BQ8IUX1 230 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SLITRK4Q8IW52 837 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 ST13P4Q8IZP2 240 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 KIRREL3Q8IZU9 778 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PDIK1LQ8N165 341 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CBARPQ8N350 705 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 FSTL5Q8N475 847 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 ARL14Q8N4G2 192 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 NPWQ8N729 165 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 WDR48Q8TAF3 677 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SLC35B2Q8TB61 432 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 FNIP1Q8TF40 1166 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 PYROXD1Q8WU10 500 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MZB1Q8WU39 189 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SCG3Q8WXD2 468 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 PMEPA1Q969W9 287 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 COL26A1Q96A83 441 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 LRRC39Q96DD0 335 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MTBPQ96DY7 904 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MED8Q96G25 268 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CELF6Q96J87 481 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 MCEEQ96PE7 176 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CCNL2Q96S94 520 aaPredicted RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 MIPEPQ99797 713 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TMEM168Q9H0V1 697 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 LRRN3Q9H3W5 708 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SUV39H2Q9H5I1 410 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 MLXIPLQ9NP71 852 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 NPHS2Q9NP85 383 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SLCO1B3Q9NPD5 702 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 EVA1BQ9NVM1 165 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 GPATCH2LQ9NWQ4 482 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 NDE1Q9NXR1 346 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 FOXJ2Q9P0K8 574 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 GULP1Q9UBP9 304 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 CIDEBQ9UHD4 219 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 APPL1Q9UKG1 709 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 TMCO1Q9UM00 188 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 GPR34Q9UPC5 381 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 R3HDM2Q9Y2K5 976 aaKnown RBP5.82□□□□□ -1.48
USP3-212ENST00000559276 PCDHGA7Q9Y5G6 932 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 IKBKGQ9Y6K9 419 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RNF215Q9Y6U7 377 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 RELNP78509 3460 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 SDK2Q58EX2 2172 aa5.82□□□□□ -1.48
USP3-212ENST00000559276 hCG_1818297A0A087WSY0 165 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms