RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 SPPL2CQ8IUH8 684 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 SFRP1Q8N474 314 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 TMEM199Q8N511 208 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 PPP2R3CQ969Q6 453 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 SLCO4A1Q96BD0 722 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 EPS15L1Q9UBC2 864 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 CD300AQ9UGN4 299 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 CIDEBQ9UHD4 219 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 AURKCQ9UQB9 309 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 ASB3Q9Y575 518 aa10.46□□□□□ -0.73
CUX1-217ENST00000558836 CROCCQ5TZA2 2017 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 MYOCOSA0A1B0GUC4 107 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 FXYD1O00168 92 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 TYRP14679 529 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 UQCRBP14927 111 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 PSMC3P17980 439 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 SPAM1P38567 509 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 ADARP55265 1226 aaKnown RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 SNRPD1P62314 119 aaKnown RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 HMGCS1Q01581 520 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 ARHGEF7Q14155 803 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 ADGRE1Q14246 886 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 TLR1Q15399 786 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 RFTN2Q52LD8 501 aaPredicted RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 LY6G5CQ5SRR4 150 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 TMEM215Q68D42 235 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 TXNDC11Q6PKC3 985 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 CERS6Q6ZMG9 384 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 RBM23Q86U06 439 aaKnown RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 SLC15A3Q8IY34 581 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 MYO1HQ8N1T3 1032 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 BEND7Q8N7W2 519 aaPredicted RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 PCYOX1LQ8NBM8 494 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 PPWD1Q96BP3 646 aaKnown RBP10.46□□□□□ -0.74
CUX1-217ENST00000558836 LRRC58Q96CX6 371 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 CMTM6Q9NX76 183 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 GNPTGQ9UJJ9 305 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 APPL1Q9UKG1 709 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 AP4S1Q9Y587 144 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 V9GYQ6 96 aa10.46□□□□□ -0.74
CUX1-217ENST00000558836 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 MAGEA13PA6NCF6 341 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ASPDHA6ND91 283 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 CASQ2O14958 399 aaPredicted RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 TIPRLO75663 272 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 MTHFD1P11586 935 aaKnown RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 IDO1P14902 403 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 NCK1P16333 377 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ATP6V1B2P21281 511 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 SLC6A2P23975 617 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 RFC2P35250 354 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PEX19P40855 299 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 B4GALNT1Q00973 533 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 C6orf52Q5T4I8 152 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 OR52E8Q6IFG1 317 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 BLOC1S3Q6QNY0 202 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 CCDC149Q6ZUS6 474 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 NXPE1Q8N323 547 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 CPXM2Q8N436 756 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ZBTB2Q8N680 514 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 SCRN2Q96FV2 425 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 BRD9Q9H8M2 597 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 INTS7Q9NVH2 962 aaKnown RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 C6orf203Q9P0P8 240 aaPredicted RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 B4GALT6Q9UBX8 382 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PCDHB1Q9Y5F3 818 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PTPRSQ13332 1948 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 GOLGA4Q13439 2230 aaKnown RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 KIAA1671Q9BY89 1806 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PRSS51A0A1B0GVH4 220 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 MOSPD3O75425 235 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 SLC22A3O75751 556 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 S100BP04271 92 aaPredicted RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 G6PDP11413 515 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 EPCAMP16422 314 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 DGKQP52824 942 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 NR6A1Q15406 480 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 XKR7Q5GH72 579 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 RARS2Q5T160 578 aaKnown RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 SLC2A7Q6PXP3 512 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 SERPINA13PQ6UXR4 307 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 MILR1Q7Z6M3 343 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ADAMTSL2Q86TH1 951 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 DHFR2Q86XF0 187 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 CANT1Q8WVQ1 401 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 POF1BQ8WVV4 589 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 PYCR2Q96C36 320 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 CNBD2Q96M20 576 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ZFP14Q9HCL3 533 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 WWOXQ9NZC7 414 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 SUCOQ9UBS9 1254 aaKnown RBP10.45□□□□□ -0.74
CUX1-217ENST00000558836 SARDHQ9UL12 918 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 ANGPTL3Q9Y5C1 460 aa10.45□□□□□ -0.74
CUX1-217ENST00000558836 TTC34A8MYJ7 566 aa10.44□□□□□ -0.74
CUX1-217ENST00000558836 SOCS5O75159 536 aa10.44□□□□□ -0.74
CUX1-217ENST00000558836 RSL1D1O76021 490 aaKnown RBP10.44□□□□□ -0.74
CUX1-217ENST00000558836 MT-ND1P03886 318 aa10.44□□□□□ -0.74
CUX1-217ENST00000558836 RHOP08100 348 aa10.44□□□□□ -0.74
CUX1-217ENST00000558836 MYOGP15173 224 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms