RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 SMG1Q96Q15 3661 aaKnown RBP12.26□□□□□ -0.45
SMAD3-208ENST00000558827 MGAT4DA6NG13 374 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 AP2A1O95782 977 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 KCNJ1P48048 391 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CCZ1BP86790 482 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CCZ1P86791 482 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-208ENST00000558827 MC2RQ01718 297 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 BRD3Q15059 726 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 OASLQ15646 514 aaKnown RBP12.25□□□□□ -0.45
SMAD3-208ENST00000558827 DCAF12Q5T6F0 453 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CACHD1Q5VU97 1274 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 METRNLQ641Q3 311 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 XKR5Q6UX68 686 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CERS6Q6ZMG9 384 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 PPP1R21Q6ZMI0 780 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 SNX20Q7Z614 316 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 DTX1Q86Y01 620 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 PIANPQ8IYJ0 282 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CLDN19Q8N6F1 224 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 IL22RA1Q8N6P7 574 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 PHC3Q8NDX5 983 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CCDC112Q8NEF3 446 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 DTX3LQ8TDB6 740 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 NKD1Q969G9 470 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 LRRC45Q96CN5 670 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 RTP4Q96DX8 246 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CDKN2AIPNLQ96HQ2 116 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 RMDN2Q96LZ7 410 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 ALS2CR12Q96Q35 445 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 COPS8Q99627 209 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 ARNT2Q9HBZ2 717 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 RAB6BQ9NRW1 208 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 POT1Q9NUX5 634 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 SMOXQ9NWM0 555 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 SLC2A6Q9UGQ3 507 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 PRSS21Q9Y6M0 314 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 BAHCC1Q9P281 2608 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 PIKFYVEQ9Y2I7 2098 aa12.25□□□□□ -0.45
SMAD3-208ENST00000558827 CCDC162PA2VCL2 907 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 B4E171 279 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 E7EVH7 732 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 STMND1H3BQB6 276 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 PSMD3O43242 534 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 CEP104O60308 925 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 RAD1O60671 282 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 C1QL1O75973 258 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 CCDC175P0C221 793 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 RALBP11234 206 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 MTHFD1P11586 935 aaKnown RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ATP1B2P14415 290 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 LIFP15018 202 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 RPL22P35268 128 aaKnown RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 TSPAN7P41732 249 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 PREPP48147 710 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ATMQ13315 3056 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 KRT33BQ14525 404 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 KCNAB1Q14722 419 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 SIX1Q15475 284 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 DBN1Q16643 649 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 P3H1Q32P28 736 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 TIPARPQ7Z3E1 657 aaKnown RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 KLHDC8BQ8IXV7 354 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 CACNA2D3Q8IZS8 1091 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 AVL9Q8NBF6 648 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 OR2L2Q8NH16 312 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 TTC9Q92623 222 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 EXTL1Q92935 676 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ULK4Q96C45 1275 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 PPM1MQ96MI6 270 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 PPP1R2P1Q96PQ5 205 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 UCK1Q9HA47 277 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 NLE1Q9NVX2 485 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ZDHHC3Q9NYG2 299 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 SMARCAL1Q9NZC9 954 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ACSL6Q9UKU0 697 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 PCDHGA4Q9Y5G9 962 aa12.24□□□□□ -0.45
SMAD3-208ENST00000558827 DNMT3AQ9Y6K1 912 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF106Q9H2Y7 1883 aaKnown RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 MN1Q10571 1320 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 OR6C74A6NCV1 312 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 POLR1CO15160 346 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 FGGP02679 453 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 C9P02748 559 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 SLC35G4P0C7Q5 338 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 ZNF28P17035 718 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 ITGB6P18564 788 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 PDHA2P29803 388 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 STIP1P31948 543 aaKnown RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 HADHAP40939 763 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 CSE1LP55060 971 aaKnown RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 SESN2P58004 480 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 PDE1BQ01064 536 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 RHDQ02161 417 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 DMPKQ09013 629 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 PRKG2Q13237 762 aa12.23□□□□□ -0.45
SMAD3-208ENST00000558827 TRIP13Q15645 432 aaPredicted RBP12.23□□□□□ -0.45
SMAD3-208ENST00000558827 BCL7AQ4VC05 210 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms