RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 EML4Q9HC35 981 aaKnown RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 PKD2L2Q9NZM6 624 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 THAP10Q9P2Z0 257 aaPredicted RBP12.76□□□□□ -0.37
SMAD3-207ENST00000558763 SUN2Q9UH99 717 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 ZNF225Q9UK10 706 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 PCTPQ9UKL6 214 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 TRAF6Q9Y4K3 522 aa12.76□□□□□ -0.37
SMAD3-207ENST00000558763 EDDM13A0A1B0GTR0 161 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 MAN2B1O00754 1011 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 SKAP2O75563 359 aaPredicted RBP12.75□□□□□ -0.37
SMAD3-207ENST00000558763 EPHX1P07099 455 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 FGF4P08620 206 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 SATB1Q01826 763 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 KLF10Q13118 480 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 RIPK1Q13546 671 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 CHSY3Q70JA7 882 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMAD3-207ENST00000558763 ZBTB2Q8N680 514 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 CPSF7Q8N684 471 aaKnown RBP12.75□□□□□ -0.37
SMAD3-207ENST00000558763 POU5F2Q8N7G0 328 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 AGAP11Q8TF27 550 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 FAR2Q96K12 515 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 WNT16Q9UBV4 365 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 ADAMTS6Q9UKP5 1117 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 STK38LQ9Y2H1 464 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 STON1Q9Y6Q2 735 aa12.75□□□□□ -0.37
SMAD3-207ENST00000558763 NCF1BA6NI72 391 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 NCF1CA8MVU1 366 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 E2F3O00716 465 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TRIM16O95361 564 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 NCF1P14598 390 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 NCF2P19878 526 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PRKCQQ04759 706 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 CLCQ05315 142 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 LCP2Q13094 533 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 CCINQ13939 588 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 KANK2Q63ZY3 851 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ADAMTSL2Q86TH1 951 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 GPSM1Q86YR5 675 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 UBALD2Q8IYN6 164 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TMIEQ8NEW7 156 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ACTRT2Q8TDY3 377 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ULK4Q96C45 1275 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 FAM83DQ9H4H8 585 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 SPATS2LQ9NUQ6 558 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 FIS1Q9Y3D6 152 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 DNAJC15Q9Y5T4 150 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ST14Q9Y5Y6 855 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TRPC5OSA6NMA1 111 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 B2RBV5 119 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 AREL1O15033 823 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PRNPP04156 253 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ITGB7P26010 798 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PRDX3P30048 256 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 HNRNPH1P31943 449 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 CCR7P32248 378 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ELAVL3Q14576 367 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 UBXN2BQ14CS0 331 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PHKG1Q16816 387 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ACAD11Q709F0 780 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 RAB44Q7Z6P3 723 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PARP9Q8IXQ6 854 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 IL17RCQ8NAC3 791 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PDPRQ8NCN5 879 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 RPLP0P6Q8NHW5 317 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 HMGCLL1Q8TB92 370 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 PIP4K2CQ8TBX8 421 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TRPC4APQ8TEL6 797 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 ESAMQ96AP7 390 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 C3orf30Q96M34 536 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 COQ10AQ96MF6 247 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 RAB3IPQ96QF0 476 aaPredicted RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 KCNA7Q96RP8 456 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 RIOK2Q9BVS4 552 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 SPATA16Q9BXB7 569 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 FOXQ1Q9C009 403 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 C1orf21Q9H246 121 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TUBB1Q9H4B7 451 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 UTP6Q9NYH9 597 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 NUDT4Q9NZJ9 180 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 KLHL42Q9P2K6 505 aa12.74□□□□□ -0.37
SMAD3-207ENST00000558763 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
SMAD3-207ENST00000558763 MEI4A8MW99 385 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 KPNA3O00505 521 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 GYG2O15488 501 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 MTX2O75431 263 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 KLF8O95600 359 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 ATP6V1G2O95670 118 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 SOD1P00441 154 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 AOAHP28039 575 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 PRDX6P30041 224 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 C18orf21Q32NC0 220 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 TTC31Q49AM3 519 aaPredicted RBP12.73□□□□□ -0.37
SMAD3-207ENST00000558763 ANKS6Q68DC2 871 aa12.73□□□□□ -0.37
SMAD3-207ENST00000558763 Q6ZS52 159 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms