RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 SH3KBP1Q96B97 665 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 CXorf40BQ96DE9 158 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 FCRL3Q96P31 734 aaPredicted RBP12.12□□□□□ -0.47
SMAD3-205ENST00000558428 DEPDC7Q96QD5 511 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 GFM1Q96RP9 751 aaKnown RBP12.12□□□□□ -0.47
SMAD3-205ENST00000558428 SLC38A3Q99624 504 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 DPH5Q9H2P9 285 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 WDR37Q9Y2I8 494 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 AKAP13Q12802 2813 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 CHD8Q9HCK8 2581 aa12.12□□□□□ -0.47
SMAD3-205ENST00000558428 ZCWPW2A0A1B0GU75 182 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 C17orf113A0A1B0GUU1 675 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 F8W8V4 182 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 B4GAT1O43505 415 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 CSO75390 466 aaKnown RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 NDUFS3O75489 264 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 FTH1P02794 183 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 POLBP06746 335 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 GSTM1P09488 218 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 PGAM1P18669 254 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 XRCC1P18887 633 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 SLC19A1P41440 591 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 ARL4CP56559 192 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 GSTM4Q03013 218 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 SDCCAG8Q86SQ7 713 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 PDIK1LQ8N165 341 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 LILRA3Q8N6C8 439 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 PWWP2AQ96N64 755 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 WWP1Q9H0M0 922 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 POT1Q9NUX5 634 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 ZNF624Q9P2J8 865 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 ACSL5Q9ULC5 683 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 ATXN7L1Q9ULK2 861 aaPredicted RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 UTP11Q9Y3A2 253 aaKnown RBP12.11□□□□□ -0.47
SMAD3-205ENST00000558428 MRFAP1Q9Y605 127 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 FRYQ5TBA9 3013 aa12.11□□□□□ -0.47
SMAD3-205ENST00000558428 WDFY3Q8IZQ1 3526 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 UBA6A0AVT1 1052 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 D6RAR5 112 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 PRMT5O14744 637 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 PFDN6O15212 129 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 SLC35G4P0C7Q5 338 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ITGB6P18564 788 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 THOC5Q13769 683 aaKnown RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 TUBB2AQ13885 445 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 RPE65Q16518 533 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 HIF1AQ16665 826 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ISXQ2M1V0 245 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 DUPD1Q68J44 220 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 NEPROQ6NW34 567 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ZNF449Q6P9G9 518 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 XKR5Q6UX68 686 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 GPR150Q8NGU9 434 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ELMO1Q92556 727 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 AHCYL2Q96HN2 611 aaKnown RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 C12orf66Q96MD2 445 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 EBNA1BP2Q99848 306 aaKnown RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 NAT9Q9BTE0 207 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 TUBB2BQ9BVA1 445 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 RAB17Q9H0T7 212 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 C20orf96Q9NUD7 363 aaPredicted RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 IMP3Q9NV31 184 aaKnown RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 WHRNQ9P202 907 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 PCDHB1Q9Y5F3 818 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 CFAP20Q9Y6A4 193 aaKnown RBP12.1□□□□□ -0.47
SMAD3-205ENST00000558428 FAM169AQ9Y6X4 670 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 ACACBO00763 2458 aa12.1□□□□□ -0.47
SMAD3-205ENST00000558428 PRAMEF33A0A0G2JMD5 474 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 LILRA5A6NI73 299 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TP73O15350 636 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 CPNE6O95741 557 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 TTC4O95801 387 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 MTHFD1P11586 935 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 OGNP20774 298 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 CD1CP29017 333 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 ELK3P41970 407 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 MAPK9P45984 424 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 PREPP48147 710 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 PDX1P52945 283 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 EPHA4P54764 986 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 EIF3BP55884 814 aaKnown RBP12.09□□□□□ -0.47
SMAD3-205ENST00000558428 GPLD1P80108 840 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 CAMK2BQ13554 666 aa12.09□□□□□ -0.47
SMAD3-205ENST00000558428 BOP1Q14137 746 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms