RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ELFN1P0C7U0 828 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 MPSTP25325 297 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 CD86P42081 329 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 MAGEA3P43357 314 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 MMP13P45452 471 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 ATP1A2P50993 1020 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 LIMK2P53671 638 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 FOXK1P85037 733 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 DSC2Q02487 901 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 GPS2Q13227 327 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 EFTUD2Q15029 972 aaKnown RBP eCLIP11.06□□□□□ -0.645e-7■■■■□ 25.4
RABGGTA-204ENST00000558376 PCSK7Q16549 785 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 DNAJC21Q5F1R6 531 aaKnown RBP11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 ITPRIPL1Q6GPH6 555 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 LRRC8BQ6P9F7 803 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 CLEC18BQ6UXF7 455 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 GOLGA6L1Q8N7Z2 621 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 CLEC18CQ8NCF0 446 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 IPMKQ8NFU5 416 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 COQ10AQ96MF6 247 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 FCRL5Q96RD9 977 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 CDH19Q9H159 772 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 WDR26Q9H7D7 661 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 ATP13A3Q9H7F0 1226 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 CARS2Q9HA77 564 aaKnown RBP11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 TMEM9Q9P0T7 183 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 VPS18Q9P253 973 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 TBK1Q9UHD2 729 aa11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 RP1L1Q8IWN7 2480 aaPredicted RBP11.06□□□□□ -0.64
RABGGTA-204ENST00000558376 POC1B-GALNT4F8VUJ3 575 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 TRAFD1O14545 582 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 NDC80O14777 642 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 MMP2P08253 660 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 MYZAPP0CAP1 466 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 GCAP28676 217 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 SERPINA4P29622 427 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CSF2RBP32927 897 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 ACOX1Q15067 660 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CLPPQ16740 277 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CCDC38Q502W7 563 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CASC4Q6P4E1 433 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 PPP1R21Q6ZMI0 780 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CACNA2D3Q8IZS8 1091 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CYP4X1Q8N118 509 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 TEX26Q8N6G2 289 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 IL22RA1Q8N6P7 574 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 DNAAF3Q8N9W5 541 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 FBF1Q8TES7 1133 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 TEX101Q9BY14 249 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 FRMD8Q9BZ67 464 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 MED4Q9NPJ6 270 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 SYBUQ9NX95 663 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 IL1RAPL1Q9NZN1 696 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 B4GALT6Q9UBX8 382 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 ZC3H7BQ9UGR2 993 aaKnown RBP11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 PLEKHM1Q9Y4G2 1056 aa11.05□□□□□ -0.64
RABGGTA-204ENST00000558376 CCDC78A2IDD5 438 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SDR42E2A6NKP2 422 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 RASGRF2O14827 1237 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 EIF3HO15372 352 aaKnown RBP eCLIP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 NKX2-8O15522 239 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CR2P20023 1033 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CHRNA4P43681 627 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 GNPDA1P46926 289 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 POLD2P49005 469 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SARNPP82979 210 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 BCL2L1Q07817 233 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SQSTM1Q13501 440 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 TRA2AQ13595 282 aaKnown RBP eCLIP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 PRPSAP1Q14558 356 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 UNC5AQ6ZN44 842 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 NAGSQ8N159 534 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CBARPQ8N350 705 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 ARRDC2Q8TBH0 407 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 MRGPRX2Q96LB1 330 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 EBNA1BP2Q99848 306 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 GSDMCQ9BYG8 508 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SPRY4Q9C004 299 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 ZNF71Q9NQZ8 489 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 EIF2B3Q9NR50 452 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SLC39A1Q9NY26 324 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SUFUQ9UMX1 484 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 NOVA2Q9UNW9 492 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 IGHV1OR21-1A0A087WYE8 117 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 TCRBV9S1A1TA0A576 114 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 DUX1O43812 170 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 RAD1O60671 282 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 SUN1O94901 812 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CPP00450 1065 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 MYCLP1P12525 358 aaPredicted RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 GP1BBP13224 206 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CASRP41180 1078 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 GPR3P46089 330 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CCR10P46092 362 aa11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 EIF3BP55884 814 aaKnown RBP11.04□□□□□ -0.64
RABGGTA-204ENST00000558376 CDK16Q00536 496 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms