RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SLC9B2Q86UD5 537 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 TICAM1Q8IUC6 712 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PLXDC1Q8IUK5 500 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 RASGRP3Q8IV61 690 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 APLFQ8IW19 511 aaPredicted RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 LZTR1Q8N653 840 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CNTD1Q8N815 330 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CT55Q8WUE5 264 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 SH3KBP1Q96B97 665 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 AP2M1Q96CW1 435 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 SCRN2Q96FV2 425 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 TCTN2Q96GX1 697 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 COX14Q96I36 57 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 SMIM14Q96QK8 99 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 OR6C1Q96RD1 312 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 NUDCD1Q96RS6 583 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PEBP4Q96S96 227 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 RUFY1Q96T51 708 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 MGME1Q9BQP7 344 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ABCG8Q9H221 673 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 EPB41L1Q9H4G0 881 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ACTL8Q9H568 366 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 DHX35Q9H5Z1 703 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 STN1Q9H668 368 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 OGFRQ9NZT2 677 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 CNOT8Q9UFF9 292 aaKnown RBP5.77□□□□□ -1.49
VPS33B-207ENST00000557470 ZNHIT2Q9UHR6 403 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 LNPEPQ9UIQ6 1025 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 KCND3Q9UK17 655 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PHTF1Q9UMS5 762 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 PCDHGA6Q9Y5G7 932 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 MED13Q9UHV7 2174 aa5.77□□□□□ -1.49
VPS33B-207ENST00000557470 TNRC6AQ8NDV7 1962 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 APCP25054 2843 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 KIR2DS5A0A0G2JLQ3 304 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 A0A0G2JNG1 304 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 A0A1W2PQ67 120 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 FAM221AA4D161 298 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 GOLGA6L3A6NEY3 463 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 LILRA5A6NI73 299 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 EIF3CLB5ME19 914 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 KIR2DS3K7RE56 304 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 KIF1CO43896 1103 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SNX2O60749 519 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PGLSO95336 258 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 DDAH2O95865 285 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PDHA1P08559 390 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ACP5P13686 325 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 F3P13726 295 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 EDN3P14138 238 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 NFKB1P19838 968 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 NFKBIAP25963 317 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 TNFRSF8P28908 595 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 HSPA9P38646 679 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 GARSP41250 739 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 LEPRP48357 1165 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 TERF1P54274 439 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 MAXP61244 160 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 UBE2IP63279 158 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 TMPRSS15P98073 1019 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CHAF1BQ13112 559 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 IL10RAQ13651 578 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 DPYSQ14117 519 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 IL11RAQ14626 422 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 KIR2DS5Q14953 304 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 INPP5JQ15735 1006 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PPP6R3Q5H9R7 873 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ERMARDQ5T6L9 678 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ARMC12Q5T9G4 340 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 DCUN1D2Q6PH85 259 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CYP4V2Q6ZWL3 525 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF765Q7L2R6 523 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 REC114Q7Z4M0 266 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ARFGAP1Q8N6T3 406 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 MLKLQ8NB16 471 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 EXD1Q8NHP7 514 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 NUDT8Q8WV74 236 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PIH1D2Q8WWB5 315 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CLIP3Q96DZ5 547 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 C9orf72Q96LT7 481 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF599Q96NL3 588 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 TGM7Q96PF1 710 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 EIF3CQ99613 913 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SLC25A23Q9BV35 468 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SNRNP25Q9BV90 132 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 RIOK2Q9BVS4 552 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 BRD8Q9H0E9 1235 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ZNF768Q9H5H4 540 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 AKIRIN1Q9H9L7 192 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 MLXIPLQ9NP71 852 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 NLRC4Q9NPP4 1024 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 LHX9Q9NQ69 397 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 FAM207AQ9NSI2 230 aaPredicted RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 SEPT11Q9NVA2 429 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 DNAJB12Q9NXW2 375 aaKnown RBP5.76□□□□□ -1.49
VPS33B-207ENST00000557470 TAB2Q9NYJ8 693 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 VPS18Q9P253 973 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 CPNE7Q9UBL6 633 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 PCSK1NQ9UHG2 260 aa5.76□□□□□ -1.49
VPS33B-207ENST00000557470 ERRFI1Q9UJM3 462 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms