RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 DKK1O94907 266 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 F3P13726 295 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 VCLP18206 1134 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 IDSP22304 550 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 RPS3P23396 243 aaKnown RBP eCLIP20.52■□□□□ 0.887e-13■□□□□ 10.3
SEC23A-213ENST00000557280 SSTR1P30872 391 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 FMO4P31512 558 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 CLDN6P56747 220 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 CLCA4Q14CN2 919 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 TEX35Q5T0J7 233 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 METRNLQ641Q3 311 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 IYDQ6PHW0 289 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 DGLUCYQ7Z3D6 616 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 SDCCAG8Q86SQ7 713 aaPredicted RBP20.52■□□□□ 0.88
SEC23A-213ENST00000557280 CFAP206Q8IYR0 622 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 HM13Q8TCT9 377 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 PYROXD1Q8WU10 500 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 GLMNQ92990 594 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 CCDC74AQ96AQ1 378 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 FAM167BQ9BTA0 163 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 PHACTR1Q9C0D0 580 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 COG4Q9H9E3 785 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 FBXO5Q9UKT4 447 aa20.52■□□□□ 0.88
SEC23A-213ENST00000557280 CNOT1A5YKK6 2376 aaKnown RBP20.52■□□□□ 0.88
SEC23A-213ENST00000557280 OR52A4PA6NMU1 304 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 RFPL3O75679 317 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 PIAS1O75925 651 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 OR56A5P0C7T3 313 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 PPARGP37231 505 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 ABCG1P45844 678 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 PREPP48147 710 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 RPIAP49247 311 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 GPX6P59796 221 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 RNF187Q5TA31 235 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 N4BP2L1Q5TBK1 243 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 CNTN4Q8IWV2 1026 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 C2CD4AQ8NCU7 369 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 SPDYE1Q8NFV5 336 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 GSDMBQ8TAX9 411 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 RMDN2Q96LZ7 410 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 TCF12Q99081 682 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 WWP1Q9H0M0 922 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 PPANQ9NQ55 473 aaKnown RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 NCKIPSDQ9NZQ3 722 aa20.51■□□□□ 0.87
SEC23A-213ENST00000557280 ZNF624Q9P2J8 865 aaPredicted RBP20.51■□□□□ 0.87
SEC23A-213ENST00000557280 PPM1DO15297 605 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 KCNJ13O60928 360 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 NIPSNAP2O75323 286 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 TRIM16O95361 564 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 FTH1P02794 183 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 GABRB3P28472 473 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 PDHA2P29803 388 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 CCR7P32248 378 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 MAGEA4P43358 317 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 BOP1Q14137 746 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 FRG1Q14331 258 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 BRD3Q15059 726 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 AGAP9Q5VTM2 703 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 PTRHD1Q6GMV3 140 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 DUS1LQ6P1R4 473 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 ZNF549Q6P9A3 640 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 CNSTQ6PJW8 725 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 ABRAXAS1Q6UWZ7 409 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 ZNF761Q86XN6 746 aaPredicted RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 MAPK15Q8TD08 544 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 ELMO1Q92556 727 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 FAM136AQ96C01 138 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 FOXP3Q9BZS1 431 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 SMYD2Q9NRG4 433 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 INTS10Q9NVR2 710 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 LRIT1Q9P2V4 623 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 GNPTGQ9UJJ9 305 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 CFAP20Q9Y6A4 193 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 PIKFYVEQ9Y2I7 2098 aa20.5■□□□□ 0.87
SEC23A-213ENST00000557280 GOLGA4Q13439 2230 aaKnown RBP20.5■□□□□ 0.87
SEC23A-213ENST00000557280 C17orf113A0A1B0GUU1 675 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 QSOX1O00391 747 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 HAUS5O94927 633 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 DUSP3P51452 185 aaPredicted RBP20.49■□□□□ 0.87
SEC23A-213ENST00000557280 CSE1LP55060 971 aaKnown RBP20.49■□□□□ 0.87
SEC23A-213ENST00000557280 UBE2IP63279 158 aaKnown RBP20.49■□□□□ 0.87
SEC23A-213ENST00000557280 TEDDM1Q5T9Z0 273 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 DHRS13Q6UX07 377 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 WASH2PQ6VEQ5 465 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 LMNTD2Q8IXW0 634 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 GSPT2Q8IYD1 628 aaKnown RBP20.49■□□□□ 0.87
SEC23A-213ENST00000557280 CALML6Q8TD86 181 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 NAT6Q93015 286 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 CCDC3Q9BQI4 270 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 OR52A5Q9H2C5 316 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 VPS37BQ9H9H4 285 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 WASH6PQ9NQA3 447 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 MOCS1Q9NZB8 636 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 GALPQ9UBC7 116 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 NFU1Q9UMS0 254 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 PSAT1Q9Y617 370 aa20.49■□□□□ 0.87
SEC23A-213ENST00000557280 KIR2DS5A0A0G2JLQ3 304 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 A0A0G2JNG1 304 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 KIR2DS3K7RE56 304 aa20.48■□□□□ 0.87
SEC23A-213ENST00000557280 C1QAP02745 245 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms