RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 EPB41L1Q9H4G0 881 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 VPS37BQ9H9H4 285 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 XAB2Q9HCS7 855 aaKnown RBP22.41■■□□□ 1.18
TDP1-216ENST00000556867 RNF14Q9UBS8 474 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 ACSL5Q9ULC5 683 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 SOX13Q9UN79 622 aa22.41■■□□□ 1.18
TDP1-216ENST00000556867 KMT2BQ9UMN6 2715 aaPredicted RBP22.41■■□□□ 1.18
TDP1-216ENST00000556867 URB1O60287 2271 aaKnown RBP22.4■■□□□ 1.18
TDP1-216ENST00000556867 GSTM1P09488 218 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 NMBRP28336 390 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 GSTM4Q03013 218 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 CFHR1Q03591 330 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 PTK6Q13882 451 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 ZNF658BQ4V348 819 aaPredicted RBP22.4■■□□□ 1.18
TDP1-216ENST00000556867 ZNF574Q6ZN55 896 aaPredicted RBP22.4■■□□□ 1.18
TDP1-216ENST00000556867 CLDN19Q8N6F1 224 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 OR4D9Q8NGE8 314 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 CXorf40BQ96DE9 158 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 PRR11Q96HE9 360 aaPredicted RBP22.4■■□□□ 1.18
TDP1-216ENST00000556867 AHCYL2Q96HN2 611 aaKnown RBP22.4■■□□□ 1.18
TDP1-216ENST00000556867 TTC1Q99614 292 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 CCM2Q9BSQ5 444 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 SLC40A1Q9NP59 571 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 PSMD13Q9UNM6 376 aa22.4■■□□□ 1.18
TDP1-216ENST00000556867 IGHV5-10-1A0A0J9YXX1 117 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 QSOX1O00391 747 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 MLLT3P42568 568 aaPredicted RBP22.39■■□□□ 1.17
TDP1-216ENST00000556867 PTGIRP43119 386 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 RPE65Q16518 533 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 TBC1D25Q3MII6 688 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 FASTKD1Q53R41 847 aaKnown RBP22.39■■□□□ 1.17
TDP1-216ENST00000556867 AARS2Q5JTZ9 985 aaKnown RBP22.39■■□□□ 1.17
TDP1-216ENST00000556867 PHF19Q5T6S3 580 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 RAB11FIP2Q7L804 512 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 NAT8LQ8N9F0 302 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 TMEM159Q96B96 161 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 RUNDC3BQ96NL0 473 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 SERPINB12Q96P63 405 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 TBC1D10AQ9BXI6 508 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 ASCL3Q9NQ33 180 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 CATSPERZQ9NTU4 200 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 FAM8A1Q9UBU6 413 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 ZZEF1O43149 2961 aa22.39■■□□□ 1.17
TDP1-216ENST00000556867 PMS2P1A4D2B8 440 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 SRRM3A6NNA2 597 aaPredicted RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 PLD2O14939 933 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 AVILO75366 819 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 SLC35G4P0C7Q5 338 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 MTHFD1P11586 935 aaKnown RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 HOXB3P14651 431 aaPredicted RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 PAFAH1B1P43034 410 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 MAGEA3P43357 314 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 LIMK2P53671 638 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 ETF1P62495 437 aaKnown RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 TRA2AQ13595 282 aaKnown RBP eCLIP22.38■■□□□ 1.17
TDP1-216ENST00000556867 SEMA3AQ14563 771 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 RNASEH2BQ5TBB1 312 aaKnown RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 TMEM71Q6P5X7 295 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 WDR74Q6RFH5 385 aaPredicted RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 PPIL6Q8IXY8 311 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 CFAP206Q8IYR0 622 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 LILRA3Q8N6C8 439 aaPredicted RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 CCDC74BQ96LY2 380 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 ZNF578Q96N58 590 aaPredicted RBP22.38■■□□□ 1.17
TDP1-216ENST00000556867 WWP1Q9H0M0 922 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 COG4Q9H9E3 785 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 PDP2Q9P2J9 529 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 ASIC3Q9UHC3 531 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 PRSS21Q9Y6M0 314 aa22.38■■□□□ 1.17
TDP1-216ENST00000556867 PKD1L2Q7Z442 2459 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 PRAMEF33A0A0G2JMD5 474 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 CCDC188H7C350 402 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 HGSO14964 777 aaPredicted RBP22.37■■□□□ 1.17
TDP1-216ENST00000556867 THRAP10827 490 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 ARNTP27540 789 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 PPARGP37231 505 aaPredicted RBP22.37■■□□□ 1.17
TDP1-216ENST00000556867 ERVPABLB-1P60509 514 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 GPR18Q14330 331 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 SYDE1Q6ZW31 735 aaPredicted RBP22.37■■□□□ 1.17
TDP1-216ENST00000556867 KLHL7Q8IXQ5 586 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 MPP5Q8N3R9 675 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 FBXO39Q8N4B4 442 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 GPR150Q8NGU9 434 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 SNIP1Q8TAD8 396 aaKnown RBP22.37■■□□□ 1.17
TDP1-216ENST00000556867 MFSD3Q96ES6 412 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 RMDN2Q96LZ7 410 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 SLC46A1Q96NT5 459 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 ZMYND15Q9H091 742 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 TMEM9Q9P0T7 183 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 MARCH4Q9P2E8 410 aaPredicted RBP22.37■■□□□ 1.17
TDP1-216ENST00000556867 ANAPC5Q9UJX4 755 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 RAXQ9Y2V3 346 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 LOXL2Q9Y4K0 774 aa22.37■■□□□ 1.17
TDP1-216ENST00000556867 SDR42E2A6NKP2 422 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 GOLGA8MH3BSY2 632 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 DNALI1O14645 258 aaPredicted RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 CD3EAPO15446 510 aaKnown RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 TLX3O43711 291 aaPredicted RBP22.36■■□□□ 1.17
TDP1-216ENST00000556867 OR1I1O60431 355 aa22.36■■□□□ 1.17
TDP1-216ENST00000556867 FTH1P02794 183 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms