RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 GPS2Q13227 327 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 GIT2Q14161 759 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 FAM69AQ5T7M9 428 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 TMEM184AQ6ZMB5 413 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 NIPA1Q7RTP0 329 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 TRMT1LQ7Z2T5 733 aaKnown RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 PLA2G4DQ86XP0 818 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 TMC8Q8IU68 726 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 MB21D2Q8IYB1 491 aaPredicted RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 BICD2Q8TD16 824 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 CCDC12Q8WUD4 166 aaPredicted RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 SLC35F5Q8WV83 523 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 SUSD6Q92537 303 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 GFM1Q96RP9 751 aaKnown RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 NTPCRQ9BSD7 190 aaKnown RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 ZNF577Q9BSK1 485 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 AGXT2Q9BYV1 514 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 NUF2Q9BZD4 464 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 SLCO5A1Q9H2Y9 848 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 UBN1Q9NPG3 1134 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 BEX4Q9NWD9 120 aaPredicted RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 SLC25A10Q9UBX3 287 aaPredicted RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 RAI2Q9Y5P3 530 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 PTGDR2Q9Y5Y4 395 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 CYP46A1Q9Y6A2 500 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 BDP1A6H8Y1 2624 aa5.19□□□□□ -1.58
HIF1A-209ENST00000556827 SPTBN5Q9NRC6 3674 aaKnown RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 PRRC2BQ5JSZ5 2229 aaKnown RBP5.19□□□□□ -1.58
HIF1A-209ENST00000556827 COL4A4P53420 1690 aaPredicted RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 SCN5AQ14524 2016 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 EVPLQ92817 2033 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GOLGA6L10A0A0M3HER8 536 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CBY3A6NI87 242 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 C4orf47A7E2U8 309 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 PRSS44E7EML9 344 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 SH2B2O14492 632 aaPredicted RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 ZBTB43O43298 467 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 SLC28A2O43868 658 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 TACC1O75410 805 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CXCL14O95715 111 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GNA11P29992 359 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 TTKP33981 857 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GPR12P47775 334 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CENPAP49450 140 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CXCR3P49682 368 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 EFNA5P52803 228 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 NLRP11P59045 1033 aaKnown RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 UFM1P61960 85 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 SETQ01105 290 aaPredicted RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CYP4A11Q02928 519 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 HNF4GQ14541 408 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 NONOQ15233 471 aaKnown RBP eCLIP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 BAK1Q16611 211 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 FNBP1LQ5T0N5 605 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 TMTC3Q6ZXV5 915 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GPAT4Q86UL3 456 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 RBFAQ8N0V3 343 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 MRPL43Q8N983 215 aaKnown RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 TDRD5Q8NAT2 981 aaKnown RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 MCPH1Q8NEM0 835 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 SPATA3Q8NHX4 192 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 EXOC6Q8TAG9 804 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 TMEM170AQ8WVE7 144 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 ZUFSPQ96AP4 578 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 PCYT2Q99447 389 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 MSTO1Q9BUK6 570 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GCOM2Q9BZD3 368 aaPredicted RBP5.18□□□□□ -1.58
HIF1A-209ENST00000556827 S1PR5Q9H228 398 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CATSPERBQ9H7T0 1116 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 C6orf50Q9HD87 102 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 HSPB7Q9UBY9 170 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 CDH23Q9H251 3354 aa5.18□□□□□ -1.58
HIF1A-209ENST00000556827 GBF1Q92538 1859 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 IGKV6D-21A0A0A0MT36 114 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 A0A0U1RQF3 1178 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 TYW5A2RUC4 315 aaKnown RBP5.17□□□□□ -1.58
HIF1A-209ENST00000556827 HIDE1A8MVS5 230 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 MS4A18H0YCH9 400 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 KIF1CO43896 1103 aaKnown RBP5.17□□□□□ -1.58
HIF1A-209ENST00000556827 ATP2C2O75185 946 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 C22orf31O95567 290 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 CCNE2O96020 404 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 VTNP04004 478 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 GALTP07902 379 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 SLC2A4P14672 509 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 PAX3P23760 479 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 SFNP31947 248 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 DCTDP32321 178 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 PAFAH1B1P43034 410 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 RFX2P48378 723 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 BLKP51451 505 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 VCPP55072 806 aaKnown RBP5.17□□□□□ -1.58
HIF1A-209ENST00000556827 CLDN2P57739 230 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 ZP1P60852 638 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 ITGB3BPQ13352 177 aaPredicted RBP5.17□□□□□ -1.58
HIF1A-209ENST00000556827 MYBPC2Q14324 1141 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 KRT32Q14532 448 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 SLC9B1Q4ZJI4 515 aa5.17□□□□□ -1.58
HIF1A-209ENST00000556827 RARS2Q5T160 578 aaKnown RBP5.17□□□□□ -1.58
HIF1A-209ENST00000556827 JAKMIP3Q5VZ66 844 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms