RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 RGSL1A5PLK6 1076 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 GOLGA6L22H0YM25 854 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 POLR1CO15160 346 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 MATN3O15232 486 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 PRLP01236 227 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 CYP1A2P05177 515 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 VSIG8P0DPA2 414 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 CCNCP24863 283 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 GMPRP36959 345 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 SEPHS1P49903 392 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 NR1I3Q14994 352 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ANO6Q4KMQ2 910 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 HENMT1Q5T8I9 393 aaKnown RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 TIGD7Q6NT04 549 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 RFLNAQ6ZTI6 216 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ARHGAP22Q7Z5H3 698 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 SYT9Q86SS6 491 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 GALNT13Q8IUC8 556 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 OR10G6Q8NH81 332 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ARRDC2Q8TBH0 407 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 HSPH1Q92598 858 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 SCAMP4Q969E2 229 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 FAF2Q96CS3 445 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ZNF837Q96EG3 531 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ZNF670Q9BS34 389 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ZPBPQ9BS86 351 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 EPB41L1Q9H4G0 881 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 RMI1Q9H9A7 625 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 NT5MQ9NPB1 228 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 MYO1AQ9UBC5 1043 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 CD84Q9UIB8 345 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 CNOT6Q9ULM6 557 aaKnown RBP9.87□□□□□ -0.83
SCFD1-220ENST00000556486 ADGRG4Q8IZF6 3080 aa9.87□□□□□ -0.83
SCFD1-220ENST00000556486 POLQO75417 2590 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 GPR89AB7ZAQ6 455 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 KRT86O43790 486 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 MFSD11O43934 449 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 KIAA0754O94854 1291 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 GSTP1P09211 210 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 GPR89BP0CG08 455 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 PRF1P14222 555 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 CTPS1P17812 591 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 CA4P22748 312 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 ELAVL4P26378 380 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 PBX1P40424 430 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 NOP2P46087 812 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 CLCNKAP51800 687 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 PMS2P54278 862 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 GFERP55789 205 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 RIPPLY3P57055 190 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 RPS18P62269 152 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 DPYSL3Q14195 570 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 INPP5JQ15735 1006 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 IFI16Q16666 785 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 CROCCQ5TZA2 2017 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 NCBP2-AS2Q69YL0 99 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 IYDQ6PHW0 289 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 TAB3Q8N5C8 712 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 ESX1Q8N693 406 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 AVL9Q8NBF6 648 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 GTPBP3Q969Y2 492 aaKnown RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 SH3KBP1Q96B97 665 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 IQCDQ96DY2 449 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 C19orf60Q96EN9 201 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 STAMBPL1Q96FJ0 436 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 WDR24Q96S15 920 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 AGAP2Q99490 1192 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 HERPUD2Q9BSE4 406 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 TBC1D10AQ9BXI6 508 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 LACRTQ9GZZ8 138 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 THAP2Q9H0W7 228 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 UCK1Q9HA47 277 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 FBXO8Q9NRD0 319 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 NFKBIL1Q9UBC1 381 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 ANAPC7Q9UJX3 599 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 NENFQ9UMX5 172 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 PCYT1BQ9Y5K3 369 aaPredicted RBP9.86□□□□□ -0.83
SCFD1-220ENST00000556486 CSMD2Q7Z408 3487 aa9.86□□□□□ -0.83
SCFD1-220ENST00000556486 MN1Q10571 1320 aaPredicted RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 APCP25054 2843 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 KIR2DS5A0A0G2JLQ3 304 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 A0A0G2JNG1 304 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 ARHGAP10A1A4S6 786 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 WIPF3A6NGB9 483 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 LILRA5A6NI73 299 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 ARGFXA6NJG6 315 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 OR5K4A6NMS3 321 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 ZNF487B1APH4 448 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 KIR2DS3K7RE56 304 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 MYO1FO00160 1098 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SORBS2O94875 1100 aaKnown RBP9.85□□□□□ -0.83
SCFD1-220ENST00000556486 HTR3BO95264 441 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 LDLRP01130 860 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SERPING1P05155 500 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 CD48P09326 243 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 ANKRD34CP0C6C1 535 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SKILP12757 684 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 SLC2A4P14672 509 aa9.85□□□□□ -0.83
SCFD1-220ENST00000556486 MX2P20592 715 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms