RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 PTRH1Q86Y79 214 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 CDKL3Q8IVW4 592 aaPredicted RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 BEND7Q8N7W2 519 aaPredicted RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 OSBPL8Q9BZF1 889 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 ASB8Q9H765 288 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 IMP3Q9NV31 184 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 TUBD1Q9UJT1 453 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 KCTD3Q9Y597 815 aa22.12■■□□□ 1.13
ACTN1-220ENST00000556433 MRPS18BQ9Y676 258 aaKnown RBP22.12■■□□□ 1.13
ACTN1-220ENST00000556433 TENM4Q6N022 2769 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 RCCD1A6NED2 376 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 C5orf60A6NFR6 353 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 MGAT4DA6NG13 374 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 SPAG6O75602 509 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 RBP3P10745 1247 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 NELFEP18615 380 aaKnown RBP22.11■■□□□ 1.13
ACTN1-220ENST00000556433 ADRA1AP35348 466 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 PPP1CAP62136 330 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 OLIG2Q13516 323 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 PLCL1Q15111 1095 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 DARS2Q6PI48 645 aaKnown RBP22.11■■□□□ 1.13
ACTN1-220ENST00000556433 PPP1R3BQ86XI6 285 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 STAMBPL1Q96FJ0 436 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 CALR3Q96L12 384 aaKnown RBP22.11■■□□□ 1.13
ACTN1-220ENST00000556433 PANX2Q96RD6 677 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 FAM118BQ9BPY3 351 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 WWP1Q9H0M0 922 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 FKBPLQ9UIM3 349 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 CROTQ9UKG9 612 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 CFAP20Q9Y6A4 193 aaKnown RBP22.11■■□□□ 1.13
ACTN1-220ENST00000556433 DUSP10Q9Y6W6 482 aa22.11■■□□□ 1.13
ACTN1-220ENST00000556433 SETXQ7Z333 2677 aaKnown RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 IGHV5-51A0A0C4DH38 117 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 SOWAHDA6NJG2 315 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 KCNN4O15554 427 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 SRP72O76094 671 aaKnown RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 STK10O94804 968 aaKnown RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 MTHFD1P11586 935 aaKnown RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 PSMB4P28070 264 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 ATP1A1-AS1Q5TC04 95 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 TMTC1Q8IUR5 882 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 NAT14Q8WUY8 206 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 APOBEC4Q8WW27 367 aaKnown RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 UBXN4Q92575 508 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 INSM2Q96T92 566 aaPredicted RBP22.1■■□□□ 1.13
ACTN1-220ENST00000556433 SEMA5BQ9P283 1151 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 LNPEPQ9UIQ6 1025 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 ACSL5Q9ULC5 683 aa22.1■■□□□ 1.13
ACTN1-220ENST00000556433 CCDC66A2RUB6 948 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 PJA2O43164 708 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 KATNA1O75449 491 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 IPO7O95373 1038 aaKnown RBP22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CCNYL3P0C7X3 344 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 PTPN7P35236 360 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CETN2P41208 172 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 RWDD2BP57060 319 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CRTC2Q53ET0 693 aaPredicted RBP22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CYB5D1Q6P9G0 228 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 SIDT2Q8NBJ9 832 aaKnown RBP22.09■■□□□ 1.13
ACTN1-220ENST00000556433 OR2L2Q8NH16 312 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CCDC110Q8TBZ0 833 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 SLC41A2Q96JW4 573 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 C12orf66Q96MD2 445 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 PDE7BQ9NP56 450 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 FAM8A1Q9UBU6 413 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 PADI1Q9ULC6 663 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 PCDHB3Q9Y5E6 796 aa22.09■■□□□ 1.13
ACTN1-220ENST00000556433 CRTAMO95727 393 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 FOLR1P15328 257 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 ARL4DP49703 201 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 TMPRSS15P98073 1019 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 XIAPP98170 497 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 MSLNQ13421 630 aaPredicted RBP22.08■■□□□ 1.13
ACTN1-220ENST00000556433 DNTTIP2Q5QJE6 756 aaKnown RBP22.08■■□□□ 1.13
ACTN1-220ENST00000556433 AADACL2Q6P093 401 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 C9orf43Q8TAL5 461 aaPredicted RBP22.08■■□□□ 1.13
ACTN1-220ENST00000556433 DCUN1D1Q96GG9 259 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 SPATA13Q96N96 652 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 MAP3K3Q99759 626 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 ZNF71Q9NQZ8 489 aaPredicted RBP22.08■■□□□ 1.13
ACTN1-220ENST00000556433 ASH1LQ9NR48 2969 aaKnown RBP22.08■■□□□ 1.13
ACTN1-220ENST00000556433 HRASLS2Q9NWW9 162 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 CRLS1Q9UJA2 301 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 RARRES3Q9UL19 164 aa22.08■■□□□ 1.13
ACTN1-220ENST00000556433 MYO18BQ8IUG5 2567 aa22.08■■□□□ 1.12
ACTN1-220ENST00000556433 BOD1L1Q8NFC6 3051 aa22.08■■□□□ 1.12
ACTN1-220ENST00000556433 KLHL33A6NCF5 533 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 GOLGA6L3A6NEY3 463 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 TJP3O95049 919 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 MT-ND3P03897 115 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 POLBP06746 335 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 PYGMP11217 842 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 ZNF75DP51815 510 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 PDE1BQ01064 536 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 TUBB3Q13509 450 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 KCNAB1Q14722 419 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 BCL7AQ4VC05 210 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 DUS1LQ6P1R4 473 aaKnown RBP22.07■■□□□ 1.12
ACTN1-220ENST00000556433 CFAP206Q8IYR0 622 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms