RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 C17orf113A0A1B0GUU1 675 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 LILRA5A6NI73 299 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 GOLGA8MH3BSY2 632 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 PLD2O14939 933 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 OR1I1O60431 355 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 DXOO77932 396 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 POLBP06746 335 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SLC35G4P0C7Q5 338 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 HGFP14210 728 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 RBMS1P29558 406 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 NSG1P42857 185 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 PAFAH1B1P43034 410 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SEMA3AQ14563 771 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 TBC1D25Q3MII6 688 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 LYPLAL1Q5VWZ2 237 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 CES3Q6UWW8 571 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 CERS6Q6ZMG9 384 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 CAND1Q86VP6 1230 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 MPP5Q8N3R9 675 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 LILRA3Q8N6C8 439 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 MCUQ8NE86 351 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 OR4D9Q8NGE8 314 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SLCO2A1Q92959 643 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 MFSD3Q96ES6 412 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 PRR11Q96HE9 360 aaPredicted RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SGSM3Q96HU1 749 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 CCDC74BQ96LY2 380 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 TTC1Q99614 292 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 DPYSL5Q9BPU6 564 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 MRM3Q9HC36 420 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SLC40A1Q9NP59 571 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 IMP3Q9NV31 184 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 ASIC3Q9UHC3 531 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 ACSL5Q9ULC5 683 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 SOX13Q9UN79 622 aa14.88□□□□□ -0.03
ACTN1-217ENST00000556203 CFAP20Q9Y6A4 193 aaKnown RBP14.88□□□□□ -0.03
ACTN1-217ENST00000556203 TLX3O43711 291 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 TNFSF15O95150 251 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 THRAP10827 490 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 MTHFD1P11586 935 aaKnown RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 MLNP12872 115 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 LIMK2P53671 638 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 PTK6Q13882 451 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 GPR18Q14330 331 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 C16orf72Q14CZ0 275 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 CASC4Q6P4E1 433 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 TMEM71Q6P5X7 295 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 LDB1Q86U70 411 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 RBM12BQ8IXT5 1001 aaKnown RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 NAT8LQ8N9F0 302 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 RCBTB1Q8NDN9 531 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 SPDYE1Q8NFV5 336 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 GPR150Q8NGU9 434 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 NCSTNQ92542 709 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 FGF11Q92914 225 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 TMEM159Q96B96 161 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 C12orf66Q96MD2 445 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 SLC46A1Q96NT5 459 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 SERPINB12Q96P63 405 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 INSM2Q96T92 566 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 CMKLR1Q99788 373 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 EPB41L1Q9H4G0 881 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 COG4Q9H9E3 785 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 XAB2Q9HCS7 855 aaKnown RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 ASCL3Q9NQ33 180 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 CATSPERZQ9NTU4 200 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 MARCH4Q9P2E8 410 aaPredicted RBP14.87□□□□□ -0.03
ACTN1-217ENST00000556203 ANAPC5Q9UJX4 755 aa14.87□□□□□ -0.03
ACTN1-217ENST00000556203 QSOX1O00391 747 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 UBXN7O94888 489 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 JMJD7P0C870 316 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 TYRP1P17643 537 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 AMD1P17707 334 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 ARNTP27540 789 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 CASQ1P31415 396 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 PPARGP37231 505 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 PTGIRP43119 386 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 ZNF658BQ4V348 819 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 AARS2Q5JTZ9 985 aaKnown RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 SNAP47Q5SQN1 464 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 RNASEH2BQ5TBB1 312 aaKnown RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 DUS1LQ6P1R4 473 aaKnown RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 WDR74Q6RFH5 385 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 IGF2-ASQ6U949 168 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 PPIL6Q8IXY8 311 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 RMDN2Q96LZ7 410 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 RUNDC3BQ96NL0 473 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 THSD1Q9NS62 852 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 OGFRQ9NZT2 677 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 AKAP7Q9P0M2 348 aaPredicted RBP14.86□□□□□ -0.03
ACTN1-217ENST00000556203 SAMD15Q9P1V8 674 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 PISDQ9UG56 409 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 FRYQ5TBA9 3013 aa14.86□□□□□ -0.03
ACTN1-217ENST00000556203 AKAP13Q12802 2813 aa14.85□□□□□ -0.03
ACTN1-217ENST00000556203 MAP1BP46821 2468 aaKnown RBP14.85□□□□□ -0.03
ACTN1-217ENST00000556203 SDR42E2A6NKP2 422 aa14.85□□□□□ -0.03
ACTN1-217ENST00000556203 CCDC188H7C350 402 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms