RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 TBC1D9BQ66K14 1250 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SLFN13Q68D06 897 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SPATA31D4Q6ZUB0 917 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 LDB1Q86U70 411 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 GSPT2Q8IYD1 628 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 PM20D2Q8IYS1 436 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 MDGA1Q8NFP4 955 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TSPAN14Q8NG11 270 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 RDM1Q8NG50 284 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 OR52N2Q8NGI0 321 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SGCDQ92629 289 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SLC25A28Q96A46 364 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 MARS2Q96GW9 593 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 EPSTI1Q96J88 318 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PIWIL1Q96J94 861 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ATP6V1G3Q96LB4 118 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 USP28Q96RU2 1077 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PNKPQ96T60 521 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 RAD9AQ99638 391 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZNF559Q9BR84 538 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PPIL3Q9H2H8 161 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 CDCP1Q9H5V8 836 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SLC24A2Q9UI40 661 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 AAR2Q9Y312 384 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 REXO2Q9Y3B8 237 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 TSC22D4Q9Y3Q8 395 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TMEM184BQ9Y519 407 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 AATKQ6ZMQ8 1374 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TNIKQ9UKE5 1360 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TRBV2A0A0J9YWF9 115 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZNF716A6NP11 495 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZAR1LA6NP61 321 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 HS3ST1O14792 307 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 XPO1O14980 1071 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 CHADO15335 359 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 GPR42O15529 346 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 LAMTOR5O43504 91 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 CRCPO75575 148 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 CIB2O75838 187 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 GLCEO94923 617 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TJP3O95049 919 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 CH25HO95992 272 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZNF735P0CB33 412 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 DRD5P21918 477 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ADRA1DP25100 572 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PSMB4P28070 264 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TIA1P31483 386 aaKnown RBP eCLIP3.78□□□□□ -1.8
KTN1-220ENST00000555172 MCM5P33992 734 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 IGHMBP2P38935 993 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 CCT6AP40227 531 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 HNRNPFP52597 415 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 RAE1P78406 368 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 SPIBQ01892 262 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 HHEXQ03014 270 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 LCP2Q13094 533 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 DRAP1Q14919 205 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ERCC6LQ2NKX8 1250 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 EDRF1Q3B7T1 1238 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 FUT11Q495W5 492 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PREPLQ4J6C6 727 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ARL13AQ5H913 290 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZNF585AQ6P3V2 769 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ACSM6Q6P461 480 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ANKRD16Q6P6B7 361 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ERASQ7Z444 233 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 RTN4RL2Q86UN3 420 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 WDR49Q8IV35 697 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 MCEMP1Q8IX19 187 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SRRM1Q8IYB3 904 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 ADGRF3Q8IZF5 1079 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 D2HGDHQ8N465 521 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 AMER2Q8N7J2 671 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 RASGEF1AQ8N9B8 481 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 STEAP2Q8NFT2 490 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 OR14L1PQ8NHC6 308 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 LILRB4Q8NHJ6 448 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 GDPD5Q8WTR4 605 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ATG4AQ8WYN0 398 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 FIG4Q92562 907 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 PHF21BQ96EK2 531 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ZBTB18Q99592 522 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TRIM2Q9C040 744 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 MMP27Q9H306 513 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 SYNDIG1Q9H7V2 258 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 ACTR8Q9H981 624 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 EPB41L5Q9HCM4 733 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TMEM51Q9NW97 253 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 TAS2R14Q9NYV8 317 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 KCNN3Q9UGI6 736 aa3.78□□□□□ -1.8
KTN1-220ENST00000555172 DDX25Q9UHL0 483 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 EXO1Q9UQ84 846 aaKnown RBP3.78□□□□□ -1.8
KTN1-220ENST00000555172 CCDC195A0A1B0GUA6 201 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 ANKRD61A6NGH8 418 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 PPP6CO00743 305 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 NVLO15381 856 aaKnown RBP3.77□□□□□ -1.81
KTN1-220ENST00000555172 OGG1O15527 345 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 SEC14L5O43304 696 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 SPOPO43791 374 aa3.77□□□□□ -1.81
KTN1-220ENST00000555172 HSF2BPO75031 334 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms