RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 TRIM56Q9BRZ2 755 aaKnown RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 MLPHQ9BV36 600 aaPredicted RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 MAGEB5Q9BZ81 275 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 MEAF6Q9HAF1 191 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 ARNT2Q9HBZ2 717 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 PFDN4Q9NQP4 134 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 TMPRSS4Q9NRS4 437 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 IARS2Q9NSE4 1012 aaKnown RBP11.02□□□□□ -0.65
SRP54-205ENST00000554803 ABCC13Q9NSE7 274 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 PIGVQ9NUD9 493 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
SRP54-205ENST00000554803 DNMT3LQ9UJW3 386 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 SLC39A10Q9ULF5 831 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 AP4B1Q9Y6B7 739 aa11.02□□□□□ -0.65
SRP54-205ENST00000554803 HEATR9A2RTY3 570 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 TYW5A2RUC4 315 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 C2orf78A6NCI8 922 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 PLK4O00444 970 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 TXNDC9O14530 226 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 ACOT8O14734 319 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 AIM2O14862 343 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 FLRT2O43155 660 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 RRP8O43159 456 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 ZBTB24O43167 697 aaPredicted RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 ZNF217O75362 1048 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 KAT7O95251 611 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 WISP1O95388 367 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 APODP05090 189 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 CYP17A1P05093 508 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 HDCP19113 662 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 SLC7A1P30825 629 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 EIF2DP41214 584 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 MRPL19P49406 292 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 THOP1P52888 689 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 NFKB2Q00653 900 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 FOXM1Q08050 763 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 BNIP2Q12982 314 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 NME3Q13232 169 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 GRM3Q14832 879 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 LPCAT4Q643R3 524 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 MSANTD2Q6P1R3 559 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 RNF111Q6ZNA4 994 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 CROCCP3Q8IVE0 287 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 PLD6Q8N2A8 252 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 FSTL5Q8N475 847 aaPredicted RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 TMEM151AQ8N4L1 468 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 ATPAF2Q8N5M1 289 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 FAM181AQ8N9Y4 354 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 KDM1BQ8NB78 822 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 DRAXINQ8NBI3 349 aaPredicted RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 PHC3Q8NDX5 983 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 TNIP2Q8NFZ5 429 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 OVCA2Q8WZ82 227 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 POP5Q969H6 163 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 SCYL1Q96KG9 808 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 ZNF597Q96LX8 424 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 OR52B2Q96RD2 323 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 SLC2A11Q9BYW1 496 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 WDCPQ9H6R7 721 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 POPDC3Q9HBV1 291 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 SPAG4Q9NPE6 437 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 ZDHHC4Q9NPG8 344 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 ANLNQ9NQW6 1124 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 TM7SF3Q9NS93 570 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 DDIT4Q9NX09 232 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 TRPM5Q9NZQ8 1165 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 RIMKLBQ9ULI2 386 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 RUVBL2Q9Y230 463 aaKnown RBP11.01□□□□□ -0.65
SRP54-205ENST00000554803 TCAF1Q9Y4C2 921 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 PCDHGB2Q9Y5G2 931 aa11.01□□□□□ -0.65
SRP54-205ENST00000554803 NOTCH2Q04721 2471 aa11□□□□□ -0.65
SRP54-205ENST00000554803 A0A1B0GTW7 788 aa11□□□□□ -0.65
SRP54-205ENST00000554803 FAM95CA0A1B0GW59 222 aa11□□□□□ -0.65
SRP54-205ENST00000554803 GOLGA8CPA6NN73 597 aa11□□□□□ -0.65
SRP54-205ENST00000554803 WASH4PA8MWX3 477 aa11□□□□□ -0.65
SRP54-205ENST00000554803 B8ZZF3 427 aa11□□□□□ -0.65
SRP54-205ENST00000554803 PYCARD-AS1I3L0S3 204 aa11□□□□□ -0.65
SRP54-205ENST00000554803 I6L893 689 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 KCNK1O00180 336 aa11□□□□□ -0.65
SRP54-205ENST00000554803 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 MATN3O15232 486 aa11□□□□□ -0.65
SRP54-205ENST00000554803 IRAK2O43187 625 aa11□□□□□ -0.65
SRP54-205ENST00000554803 TLR5O60602 858 aa11□□□□□ -0.65
SRP54-205ENST00000554803 VAPBO95292 243 aa11□□□□□ -0.65
SRP54-205ENST00000554803 CRTAMO95727 393 aa11□□□□□ -0.65
SRP54-205ENST00000554803 CER1O95813 267 aa11□□□□□ -0.65
SRP54-205ENST00000554803 SMIM18P0DKX4 95 aa11□□□□□ -0.65
SRP54-205ENST00000554803 FCGR1AP12314 374 aa11□□□□□ -0.65
SRP54-205ENST00000554803 HOXB6P17509 224 aaKnown RBP11□□□□□ -0.65
SRP54-205ENST00000554803 MPSTP25325 297 aa11□□□□□ -0.65
SRP54-205ENST00000554803 CD68P34810 354 aaPredicted RBP11□□□□□ -0.65
SRP54-205ENST00000554803 TNFRSF4P43489 277 aa11□□□□□ -0.65
SRP54-205ENST00000554803 SLC6A11P48066 632 aa11□□□□□ -0.65
SRP54-205ENST00000554803 NAGLUP54802 743 aa11□□□□□ -0.65
SRP54-205ENST00000554803 STX1BP61266 288 aa11□□□□□ -0.65
SRP54-205ENST00000554803 PSME3P61289 254 aa11□□□□□ -0.65
SRP54-205ENST00000554803 EFEMP1Q12805 493 aa11□□□□□ -0.65
SRP54-205ENST00000554803 EIF4EBP2Q13542 120 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms