RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 B3GNT6Q6ZMB0 384 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SEPT14Q6ZU15 432 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HACE1Q8IYU2 909 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 RNF168Q8IYW5 571 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DCP1BQ8IZD4 617 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TAGAPQ8N103 731 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PRR26Q8N8Z3 221 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 OR14A16Q8NHC5 309 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TXNDC15Q96J42 360 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 NEUROD6Q96NK8 337 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 OR2A14Q96R47 310 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACOX2Q99424 681 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SH3GL2Q99962 352 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SLC25A33Q9BSK2 321 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PCGF1Q9BSM1 259 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MAK16Q9BXY0 300 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 KCNN2Q9H2S1 579 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PPP1R3EQ9H7J1 279 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CNGB3Q9NQW8 809 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 OGFRQ9NZT2 677 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SUCLA2Q9P2R7 463 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 FBXL17Q9UF56 701 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TTC7AQ9ULT0 858 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CDC14AQ9UNH5 594 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM5Q9Y2B1 443 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 R3HDM2Q9Y2K5 976 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 RABGAP1Q9Y3P9 1069 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DDX60LQ5H9U9 1706 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MRC1P22897 1456 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LAMA5O15230 3695 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 A0A1W2PQ09 198 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CDRT15L2A8MXV6 281 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LACTBL1A8MY62 500 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 FIBPO43427 364 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DAB1O75553 588 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GJB3O75712 270 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SERPINI2O75830 405 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CAMTA2O94983 1202 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 STARD3NLO95772 234 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CH25HO95992 272 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HIST1H2ABP04908 130 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SRPRAP08240 638 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HOXC6P09630 235 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 T-ENOLP0DO92 83 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HIST1H2ADP20671 130 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 C21orf33P30042 268 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HOXA13P31271 388 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACSL1P33121 698 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PRCPP42785 496 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CAMPP49913 170 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TAS2R40P59535 323 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DSC1Q08554 894 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LRMPQ12912 555 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TRAF2Q12933 501 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GRIK2Q13002 908 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 KCTD2Q14681 263 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 EFNB3Q15768 340 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PKN2Q16513 984 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ASTE1Q2TB18 679 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PCGF3Q3KNV8 242 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LRIF1Q5T3J3 769 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CFAP58Q5T655 872 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PMS2CLQ68D20 193 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GSG1LQ6UXU4 331 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DPPA4Q7L190 304 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HIST3H2AQ7L7L0 130 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 TAOK1Q7L7X3 1001 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CACNA2D4Q7Z3S7 1137 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 FOXP4Q8IVH2 680 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 DSELQ8IZU8 1212 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 NME8Q8N427 588 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 NEXN-AS1Q8NBZ9 246 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ADAMTS14Q8WXS8 1223 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 JAKMIP2Q96AA8 810 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SAT2Q96F10 170 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ELMOD3Q96FG2 381 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 THOC3Q96J01 351 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 FEM1CQ96JP0 617 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LMLNQ96KR4 655 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 GUCD1Q96NT3 240 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 KXD1Q9BQD3 176 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SRSF8Q9BRL6 282 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 HAUS8Q9BT25 410 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PLK3Q9H4B4 646 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 LTB4R2Q9NPC1 389 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ACSS1Q9NUB1 689 aaPredicted RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SETD4Q9NVD3 440 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MTMR10Q9NXD2 777 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 CWC15Q9P013 229 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 RPS6KA6Q9UK32 745 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 AGO1Q9UL18 857 aaKnown RBP1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MYO6Q9UM54 1294 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 NENFQ9UMX5 172 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PCDHGB4Q9UN71 923 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PCDHA7Q9UN72 937 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 PCDHAC2Q9Y5I4 1007 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 USP16Q9Y5T5 823 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 SNX8Q9Y5X2 465 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 MGAMO43451 1857 aa1.52□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF646O15015 1829 aaPredicted RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms