RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 MCF2LO15068 1137 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CNPP09543 421 aaKnown RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MYZAPP0CAP1 466 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TGM2P21980 687 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 IL4RP24394 825 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 STIP1P31948 543 aaKnown RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 BRCC3P46736 316 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MAN2A2P49641 1150 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TKTL1P51854 596 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 AIF1P55008 147 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MAP3K7CLP57077 242 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 DAOAP59103 153 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 DYNLT1P63172 113 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CXADRP78310 365 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 HHEXQ03014 270 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 FPGSQ05932 587 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 SF3A3Q12874 501 aaKnown RBP eCLIP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CSHL1Q14406 222 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 KRT81Q14533 505 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 HLXQ14774 488 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MORF4L2Q15014 288 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TRIP13Q15645 432 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 P3H1Q32P28 736 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 DCAF6Q58WW2 860 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TTMPQ5BVD1 217 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 ANKRD20A8PQ5CZ79 823 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CEP85LQ5SZL2 805 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 ICE2Q659A1 982 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 DENND2CQ68D51 928 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 SLC9A4Q6AI14 798 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 SFRP4Q6FHJ7 346 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 SCYL2Q6P3W7 929 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 Q6ZSN1 163 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MICALCLQ6ZW33 695 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 GDF7Q7Z4P5 450 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CROCCP2Q86T23 111 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 RFX6Q8HWS3 928 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 THEM5Q8N1Q8 247 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 ZMIZ2Q8NF64 920 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM76AQ8TAV0 307 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 OSCP1Q8WVF1 389 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 IRGQQ8WZA9 623 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 CPT1BQ92523 772 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 P3H4Q92791 437 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 APBB2Q92870 758 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 FAM149B1Q96BN6 582 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 PGAP3Q96FM1 320 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 ATP6V1G3Q96LB4 118 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 NPY6RQ99463 290 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TTPALQ9BTX7 342 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 MAK16Q9BXY0 300 aaKnown RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 POPDC2Q9HBU9 364 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 DMAP1Q9NPF5 467 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TMEM30AQ9NV96 361 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 TBC1D13Q9NVG8 400 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 NDUFAF4Q9P032 175 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 RCOR3Q9P2K3 495 aaPredicted RBP4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 ANAPC5Q9UJX4 755 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 STAP1Q9ULZ2 295 aa4.78□□□□□ -1.64
PPP4R3A-204ENST00000554574 PTPRSQ13332 1948 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 OBSL1O75147 1896 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZAR1LA6NP61 321 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 STX16-NPEPL1H3BU86 382 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 I3L4J1 428 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 DNALI1O14645 258 aaPredicted RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 STX16O14662 325 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 RIPK2O43353 540 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TRAPPC3O43617 180 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 DDHD2O94830 711 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 OAZ2O95190 189 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TTC4O95801 387 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 CFIP05156 583 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 PDHA1P08559 390 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 HNRNPA1P09651 372 aaKnown RBP eCLIP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZFXP17010 805 aaPredicted RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 EPHA3P29320 983 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 RDXP35241 583 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 NR2C2P49116 596 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 VPS41P49754 854 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 CACNA2D1P54289 1103 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 EIF3EP60228 445 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TSPY1Q01534 308 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 YWHAHQ04917 246 aaPredicted RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 RNASELQ05823 741 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 IFFO1Q0D2I5 559 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 GPNMBQ14956 572 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 CYP2A13Q16696 494 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 OTUD1Q5VV17 481 aaPredicted RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 PM20D1Q6GTS8 502 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 MZT2BQ6NZ67 158 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 C4orf50Q6ZRC1 276 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ANKRD33Q7Z3H0 272 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TRABD2AQ86V40 505 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 HOOK3Q86VS8 718 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 DEFB106AQ8N104 65 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 TMEM132CQ8N3T6 1108 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 ZCCHC9Q8N567 271 aaKnown RBP4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 PQLC3Q8N755 202 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 PLD5Q8N7P1 536 aa4.77□□□□□ -1.65
PPP4R3A-204ENST00000554574 OR10T2Q8NGX3 314 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms