RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF529Q6P280 563 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 UTS2BQ765I0 119 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 KDELC2Q7Z4H8 507 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 STRA8Q7Z7C7 330 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PRUNE1Q86TP1 453 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CTAGE6Q86UF2 777 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CTAGE4Q8IX94 777 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PQLC1Q8N2U9 271 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ZGPATQ8N5A5 531 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 NIPA2Q8N8Q9 360 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ANKFN1Q8N957 763 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 OR56B2PQ8NGI1 322 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 METTL6Q8TCB7 284 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 FAM216AQ8WUB2 273 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 SCFD1Q8WVM8 642 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 INPP5DQ92835 1189 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RILPL2Q969X0 211 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 VPS33AQ96AX1 596 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RAX2Q96IS3 184 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 WDR24Q96S15 920 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PNKPQ96T60 521 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CCM2Q9BSQ5 444 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 TBCDQ9BTW9 1192 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 STK33Q9BYT3 514 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ACPTQ9BZG2 426 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 REXO4Q9GZR2 422 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 QRSL1Q9H0R6 528 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ABCG8Q9H221 673 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 EPS8L2Q9H6S3 715 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 MVB12BQ9H7P6 319 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 SYNDIG1Q9H7V2 258 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 UNKLQ9H9P5 680 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RNPEPL1Q9HAU8 725 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 S100A14Q9HCY8 104 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ECHDC1Q9NTX5 307 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ASB6Q9NWX5 421 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ADAM22Q9P0K1 906 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RPS6KA6Q9UK32 745 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 GAB2Q9UQC2 676 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ENTPD4Q9Y227 616 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 GINS2Q9Y248 185 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RUVBL1Q9Y265 456 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 STK38LQ9Y2H1 464 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 TDRKHQ9Y2W6 561 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 DTNAQ9Y4J8 743 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 PCDHGA8Q9Y5G5 932 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 KLF2Q9Y5W3 355 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 CSNK1G3Q9Y6M4 447 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ZHX2Q9Y6X8 837 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 COL4A6Q14031 1691 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 MAP1BP46821 2468 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 RIF1Q5UIP0 2472 aaKnown RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 FRMPD4Q14CM0 1322 aa4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ZFHX2Q9C0A1 2572 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-227ENST00000554491 ACACBO00763 2458 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MYH2Q9UKX2 1941 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PNMA6EA0A0J9YXQ4 647 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 H0YCG3 227 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SNAP23O00161 211 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ACOX3O15254 700 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DCXO43602 365 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CIAO1O76071 339 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GOSR1O95249 250 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DNTTP04053 509 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CALB1P05937 261 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 SLC3A2P08195 630 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 QDPRP09417 244 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PAEPP09466 180 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 OCM2P0CE71 109 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 OCMP0CE72 109 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CLUP10909 449 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ICAM2P13598 275 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 AKR1B1P15121 316 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 HDCP19113 662 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 KELP23276 732 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GTF2H1P32780 548 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 VHLP40337 213 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 MSH2P43246 934 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 HCAR3P49019 387 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 DIO1P49895 249 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 POLGP54098 1239 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 ATP12AP54707 1039 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PROK1P58294 105 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GPX6P59796 221 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RAB4BP61018 213 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RPL26P61254 145 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 VSNL1P62760 191 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 GCNT1Q02742 428 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CEBPZQ03701 1054 aaKnown RBP4.39□□□□□ -1.71
ATXN3-227ENST00000554491 TLE2Q04725 743 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PPP3CAQ08209 521 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 C2orf54Q08AI8 447 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 RIPPLY1Q0D2K3 151 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 CALCOCO2Q13137 446 aa4.39□□□□□ -1.71
ATXN3-227ENST00000554491 PDCLQ13371 301 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms