RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 KMOO15229 486 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 CEACAM4O75871 244 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 ZRANB2O95218 330 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 DDAH2O95865 285 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 CAPN1P07384 714 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 EBLN1P0CF75 366 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 GPR89BP0CG08 455 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 CA4P22748 312 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 PTPN4P29074 926 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 CDKN2BP42772 138 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 NAP1L1P55209 391 aaKnown RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 IFI35P80217 286 aaPredicted RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 TFDP2Q14188 446 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 LLGL1Q15334 1064 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 INSCQ1MX18 579 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 KAZNQ674X7 775 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 IRGCQ6NXR0 463 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 RAD9BQ6WBX8 426 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 B4GALNT4Q76KP1 1039 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 BZW1Q7L1Q6 419 aaKnown RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 LRRTM4Q86VH4 590 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 TRAM1L1Q8N609 369 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 AVL9Q8NBF6 648 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 CCHCR1Q8TD31 782 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 IMP4Q96G21 291 aaKnown RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 PPM1MQ96MI6 270 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 MAP3K3Q99759 626 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 BAG1Q99933 345 aaPredicted RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 ZSCAN5AQ9BUG6 496 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 MAGEE1Q9HCI5 957 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 ZNF711Q9Y462 761 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 PCDHGA9Q9Y5G4 932 aaKnown RBP11.31□□□□□ -0.6
TUBB3-204ENST00000554116 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
TUBB3-204ENST00000554116 A1L4Q6 167 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 WIPF3A6NGB9 483 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 PDZK1P1A8MUH7 402 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 GAPDHSO14556 408 aaPredicted RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 GPR39O43194 453 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CST8O60676 142 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CDK14O94921 469 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CLDN1O95832 211 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 PTGIRP43119 386 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 NR2C2P49116 596 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CTSCP53634 463 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TMEM115Q12893 351 aaPredicted RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 GPS2Q13227 327 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 MRPL49Q13405 166 aaKnown RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TUBB3Q13509 450 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 NOMO1Q15155 1222 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 RPE65Q16518 533 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TAZQ16635 292 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 PRAMEF17Q5VTA0 474 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 PDPK2PQ6A1A2 396 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 ZNF787Q6DD87 383 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 C11orf63Q6NUN7 778 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 SPOCD1Q6ZMY3 1216 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 MAMDC2Q7Z304 686 aaPredicted RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CCDC50Q8IVM0 306 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TRIM48Q8IWZ4 208 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 KATNAL2Q8IYT4 538 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 RCOR2Q8IZ40 523 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 SPATA22Q8NHS9 363 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 TCTN2Q96GX1 697 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 CALR3Q96L12 384 aaKnown RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 AGAP3Q96P47 875 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 OLFM3Q96PB7 478 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 IMPACTQ9P2X3 320 aa11.3□□□□□ -0.6
TUBB3-204ENST00000554116 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
TUBB3-204ENST00000554116 ARGFXA6NJG6 315 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 BTNL10A8MVZ5 291 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 VEGFDO43915 354 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 MT-CYBP00156 380 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 LPOP22079 712 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 IDSP22304 550 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 CCL11P51671 97 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 RIPPLY3P57055 190 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 ADCY2Q08462 1091 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 DMPKQ09013 629 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 INPP5JQ15735 1006 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 JMJD6Q6NYC1 403 aaPredicted RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 FBXO38Q6PIJ6 1188 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 TICAM1Q8IUC6 712 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 RBM12BQ8IXT5 1001 aaKnown RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 D2HGDHQ8N465 521 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 TTC30BQ8N4P2 665 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 RBMXL3Q8N7X1 1067 aaKnown RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 SIDT2Q8NBJ9 832 aaKnown RBP11.29□□□□□ -0.6
TUBB3-204ENST00000554116 SPC24Q8NBT2 197 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 ACRBPQ8NEB7 543 aa11.29□□□□□ -0.6
TUBB3-204ENST00000554116 TFB1MQ8WVM0 346 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms