RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 SLC4A1P02730 911 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 TSPAN8P19075 237 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 CCL23P55773 120 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 PLCL1Q15111 1095 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 FAM83EQ2M2I3 478 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 IL31Q6EBC2 164 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 PCDH20Q8N6Y1 951 aaKnown RBP8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 HCAR2Q8TDS4 363 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 SEPT8Q92599 483 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 TFAP2CQ92754 450 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 DEPDC7Q96QD5 511 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 SPON2Q9BUD6 331 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 ADI1Q9BV57 179 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 CHID1Q9BWS9 393 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 TTLL2Q9BWV7 592 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 EFCAB1Q9HAE3 211 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 STMN3Q9NZ72 180 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 CDYLQ9Y232 598 aa8.93□□□□□ -0.98
AL049839.2-201ENST00000553947 LAMA2P24043 3122 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 H7C4K7 107 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 SDHDO14521 159 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 SCAMP3O14828 347 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 RGS13O14921 159 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 COCHO43405 550 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ITIH1P19827 911 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ATP5C1P36542 298 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 TMBIM6P55061 237 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 P2RX3P56373 397 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 NME5P56597 212 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 DNAJB13P59910 316 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ACVR1Q04771 509 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 VAC14Q08AM6 782 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 DEFB115Q30KQ5 88 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 C5orf22Q49AR2 442 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 NHSL2Q5HYW2 709 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 AGAP9Q5VTM2 703 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ABRAXAS1Q6UWZ7 409 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 CHSY3Q70JA7 882 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ARMC8Q8IUR7 673 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PSMA8Q8TAA3 256 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 RAB2BQ8WUD1 216 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 VPS33AQ96AX1 596 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PTERQ96BW5 349 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 FBXL20Q96IG2 436 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 CNDP1Q96KN2 507 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 VPS35Q96QK1 796 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 TRIB3Q96RU7 358 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 NPAS2Q99743 824 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ALG9Q9H6U8 611 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ABCB10Q9NRK6 738 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 DNMT3LQ9UJW3 386 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ZNF840PA6NDX5 716 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 UBFD1O14562 309 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 RAD51BO15315 384 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 TSPAN3O60637 253 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PQBP1O60828 265 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 IPO13O94829 963 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 TGM1P22735 817 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ATP6V0D1P61421 351 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PPP2R2BQ00005 443 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 CHRNEQ04844 493 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 MERTKQ12866 999 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 SUZ12Q15022 739 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PTPRRQ15256 657 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 LRIT3Q3SXY7 679 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 SNAP47Q5SQN1 464 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.92□□□□□ -0.984e-14■■■■■ 41.4
AL049839.2-201ENST00000553947 PIWIL4Q7Z3Z4 852 aaKnown RBP8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 ISCA2Q86U28 154 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 SLCO6A1Q86UG4 719 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PGAM4Q8N0Y7 254 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 PBXIP1Q96AQ6 731 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 VTI1BQ9UEU0 232 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 UGT2A1Q9Y4X1 527 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 CHD5Q8TDI0 1954 aa8.92□□□□□ -0.98
AL049839.2-201ENST00000553947 CD3EAPO15446 510 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 MTRF1O75570 445 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 EFEMP2O95967 443 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 KRT6AP02538 564 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 KRT6BP04259 564 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 HMGA1P17096 107 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 SEPHS1P49903 392 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 C1QTNF8P60827 252 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 RACK1P63244 317 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 IFITM3Q01628 133 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 PRKCQQ04759 706 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 ELAVL2Q12926 359 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 SLC8B1Q6J4K2 584 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 ZCCHC8Q6NZY4 707 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 CRTC3Q6UUV7 619 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 CAMK1DQ8IU85 385 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 RP9Q8TA86 221 aaKnown RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 ZFP90Q8TF47 636 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 DACH2Q96NX9 599 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 CYP2S1Q96SQ9 504 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 TMEM175Q9BSA9 504 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 POLR3BQ9NW08 1133 aaPredicted RBP8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 COMMD8Q9NX08 183 aa8.91□□□□□ -0.98
AL049839.2-201ENST00000553947 DUS2Q9NX74 493 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms