RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 NUP54Q7Z3B4 507 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 TADA2BQ86TJ2 420 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 RPAINQ86UA6 219 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SLC9B2Q86UD5 537 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 GPAT4Q86UL3 456 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 TDRPQ86YL5 185 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ARHGAP12Q8IWW6 846 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 TUSC5Q8IXB3 177 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 KLHL7Q8IXQ5 586 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SYCP3Q8IZU3 236 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ZNF619Q8N2I2 560 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 OR4N2Q8NGD1 307 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 RASSF8Q8NHQ8 419 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 RAB40AQ8WXH6 277 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 FIG4Q92562 907 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 N4BP2L2Q92802 583 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 PTERQ96BW5 349 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 MTBPQ96DY7 904 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 DGAT2Q96PD7 388 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 PRAM1Q96QH2 718 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 OR1F2PQ96R84 312 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 IWS1Q96ST2 819 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 FERMT1Q9BQL6 677 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 FUT8Q9BYC5 575 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 ST6GALNAC4Q9H4F1 302 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 SCPEP1Q9HB40 452 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 WDR6Q9NNW5 1121 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 SNTG1Q9NSN8 517 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 C20orf141Q9NUB4 165 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 OGFRQ9NZT2 677 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 MARCH4Q9P2E8 410 aaPredicted RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 FBXL17Q9UF56 701 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 HOOK1Q9UJC3 728 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 SH3BGRL2Q9UJC5 107 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 INTS6Q9UL03 887 aaKnown RBP2.27□□□□□ -2.05
SRP54-204ENST00000553923 BLOC1S6Q9UL45 172 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 KAT6BQ8WYB5 2073 aa2.27□□□□□ -2.05
SRP54-204ENST00000553923 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 A0A1W2PS18 150 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 SYCE3A1L190 88 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 PI4K2BG5E9Z4 385 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 C16orf97H3BN30 126 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ZNF263O14978 683 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ZBTB14O43829 449 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 HS6ST1O60243 411 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 SLCO2B1O94956 709 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 NKX2-2O95096 273 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CSPG5O95196 566 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 IPO7O95373 1038 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 SUPT20HL2P0C7V6 817 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 SRCP12931 536 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ZNF8P17098 575 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 CDH2P19022 906 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 ZNF10P21506 573 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 MYF6P23409 242 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 GJC1P36383 396 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CD86P42081 329 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 PTPN9P43378 593 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MTNR1AP48039 350 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 GNAQP50148 359 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ALDH3A2P51648 485 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MVDP53602 400 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 UBASH3AP57075 661 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MRPS5P82675 430 aaKnown RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 RALGDSQ12967 914 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ALCAMQ13740 583 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CAPSQ13938 189 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TRIM29Q14134 588 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 IL11RAQ14626 422 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 LPIN1Q14693 890 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 SLC18A3Q16572 532 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ME3Q16798 604 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 FBXO43Q4G163 708 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MPP7Q5T2T1 576 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 KRT39Q6A163 491 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 NAPEPLDQ6IQ20 393 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TATDN1Q6P1N9 297 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MOB3CQ70IA8 216 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ADCK2Q7Z695 626 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 DSG4Q86SJ6 1040 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 HOOK3Q86VS8 718 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 WDR63Q8IWG1 891 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MB21D2Q8IYB1 491 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 PEX5LQ8IYB4 626 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CCDC13Q8IYE1 715 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 LYG1Q8N1E2 194 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 MCPH1Q8NEM0 835 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 NEK11Q8NG66 645 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 OR13A1Q8NGR1 328 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 GRAPLQ8TC17 118 aaPredicted RBP2.26□□□□□ -2.05
SRP54-204ENST00000553923 DUSP19Q8WTR2 217 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TEKT4Q8WW24 435 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 FAM162AQ96A26 154 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 CENPTQ96BT3 561 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 RNF183Q96D59 192 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 TMCO6Q96DC7 493 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 LGALS12Q96DT0 336 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 ELMOD3Q96FG2 381 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 AK8Q96MA6 479 aa2.26□□□□□ -2.05
SRP54-204ENST00000553923 LRFN5Q96NI6 719 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms