RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 TRIM51Q9BSJ1 452 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 POLR1BQ9H9Y6 1135 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 SIX2Q9NPC8 291 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 MTMR10Q9NXD2 777 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 EHD2Q9NZN4 543 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 DBNLQ9UJU6 430 aaKnown RBP3.61□□□□□ -1.83
SCFD1-210ENST00000553693 TMEM98Q9Y2Y6 226 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 ADCY10Q96PN6 1610 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 CACNA1FO60840 1977 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 STK36Q9NRP7 1315 aa3.61□□□□□ -1.83
SCFD1-210ENST00000553693 FAM237BA0A1B0GVD1 139 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 A0A1B0GVY2 172 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 NPHP1O15259 732 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 CREB3O43889 395 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 CSPG5O95196 566 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 FAM157CP0CG43 387 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 HSPA1AP0DMV8 641 aaKnown RBP3.6□□□□□ -1.83
SCFD1-210ENST00000553693 HSPA1BP0DMV9 641 aaKnown RBP3.6□□□□□ -1.83
SCFD1-210ENST00000553693 CEACAM1P13688 526 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 TMEM11P17152 192 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 HRH2P25021 359 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 CCR9P51686 369 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 CD81P60033 236 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 LPAL2Q16609 132 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 ACSM2BQ68CK6 577 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 GLDNQ6ZMI3 551 aaPredicted RBP3.6□□□□□ -1.83
SCFD1-210ENST00000553693 TSPAN33Q86UF1 283 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 GPALPP1Q8IXQ4 340 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 PYGO2Q9BRQ0 406 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 UBXN6Q9BZV1 441 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 WDR13Q9H1Z4 485 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 SMC4Q9NTJ3 1288 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 BARHL2Q9NY43 387 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 COQ3Q9NZJ6 369 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 MRPS28Q9Y2Q9 187 aaKnown RBP3.6□□□□□ -1.83
SCFD1-210ENST00000553693 SMAD5-AS1Q9Y6J3 95 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 FLT1P17948 1338 aa3.6□□□□□ -1.83
SCFD1-210ENST00000553693 A0A0J9YWU9 116 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 MAGEB17A8MXT2 336 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 SLC22A2O15244 555 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 OGG1O15527 345 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 ZNF217O75362 1048 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 GPC4O75487 556 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 ZNF821O75541 412 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 CDH2P19022 906 aaPredicted RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 PSMA4P25789 261 aaKnown RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 GPR143P51810 404 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 TMEM187Q14656 261 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 PCGF3Q3KNV8 242 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 GTDC1Q4AE62 458 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 FFAR4Q5NUL3 377 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 CPLX4Q7Z7G2 160 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 TMTC2Q8N394 836 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 OR2T12Q8NG77 320 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 GSDMBQ8TAX9 411 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 ARHGEF2Q92974 986 aaKnown RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 MCRIP2Q9BUT9 160 aaKnown RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 TRIM15Q9C019 465 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 TRMT1Q9NXH9 659 aaKnown RBP3.59□□□□□ -1.83
SCFD1-210ENST00000553693 PTTG2Q9NZH5 202 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 CACNG5Q9UF02 275 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 PGAP2Q9UHJ9 254 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 MTMR6Q9Y217 621 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 B3GALT5Q9Y2C3 310 aa3.59□□□□□ -1.83
SCFD1-210ENST00000553693 PPRC1Q5VV67 1664 aaKnown RBP3.59□□□□□ -1.84
SCFD1-210ENST00000553693 A0A1B0GVC2 190 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 MEIOCA2RUB1 952 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 OR2M5A3KFT3 312 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 PLOD2O00469 737 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 PLPP2O43688 288 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 TMEM63AO94886 807 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 ANXA7P20073 488 aaKnown RBP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF10P21506 573 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 EPHA2P29317 976 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 RGS2P41220 211 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 MSH2P43246 934 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GALCP54803 685 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 RPS3AP61247 264 aaKnown RBP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 TBCEQ15813 527 aaPredicted RBP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 MEP1AQ16819 746 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GAGE2AQ6NT46 116 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 NCEH1Q6PIU2 408 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 ZNF534Q76KX8 674 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GALNT5Q7Z7M9 940 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 PLD3Q8IV08 490 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 SLC47A1Q96FL8 570 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 C1orf74Q96LT6 269 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 ATOH8Q96SQ7 321 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 SEC62Q99442 399 aaKnown RBP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 NCAPGQ9BPX3 1015 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 RASAL2Q9UJF2 1139 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 GTF2A1LQ9UNN4 478 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 RABGAP1Q9Y3P9 1069 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 WRNQ14191 1432 aaPredicted RBP eCLIP3.58□□□□□ -1.84
SCFD1-210ENST00000553693 KIAA1210Q9ULL0 1709 aa3.58□□□□□ -1.84
SCFD1-210ENST00000553693 A0A087X002 238 aa3.57□□□□□ -1.84
SCFD1-210ENST00000553693 TMEM8BA6NDV4 472 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms