RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 TOX3O15405 576 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 NDUFA10O95299 355 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 DDAH2O95865 285 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PDHA1P08559 390 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 FGF5P12034 268 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 F3P13726 295 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 CTPS1P17812 591 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 TNFRSF8P28908 595 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 HSPA9P38646 679 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 MAPK9P45984 424 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 RENBPP51606 427 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 STC1P52823 247 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 FOXM1Q08050 763 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 CHAF1BQ13112 559 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 MRPL49Q13405 166 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 IL10RAQ13651 578 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF235Q14590 738 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 IHHQ14623 411 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 KIR2DS5Q14953 304 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 NKG7Q16617 165 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 USP45Q70EL2 814 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PRSS42Q7Z5A4 293 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 SLC9B2Q86UD5 537 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 FAM114A1Q8IWE2 563 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 LZTR1Q8N653 840 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PAF1Q8N7H5 531 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 MLKLQ8NB16 471 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 CT55Q8WUE5 264 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PDCD6IPQ8WUM4 868 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 SH3KBP1Q96B97 665 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 MISP3Q96FF7 219 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 STAMBPL1Q96FJ0 436 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 RHOVQ96L33 236 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 OR6C1Q96RD1 312 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 WDR24Q96S15 920 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 EIF3CQ99613 913 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 RSRP1Q9BUV0 290 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 TWSG1Q9GZX9 223 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 ACTL8Q9H568 366 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 DHX35Q9H5Z1 703 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 STN1Q9H668 368 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 UCK1Q9HA47 277 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 LHX9Q9NQ69 397 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 CPNE7Q9UBL6 633 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 ERRFI1Q9UJM3 462 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 KCND3Q9UK17 655 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 CNOT6Q9ULM6 557 aaKnown RBP7.17□□□□□ -1.26
ATXN3-219ENST00000553488 KCNK6Q9Y257 313 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PRKAB1Q9Y478 270 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 DOCK10Q96BY6 2186 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 PKDREJQ9NTG1 2253 aa7.17□□□□□ -1.26
ATXN3-219ENST00000553488 A0A0J9YYE9 177 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 FAM221AA4D161 298 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 FADS2P1A8MWK0 482 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 C21orf140B9A014 251 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 INPP4BO15327 924 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 KIF1CO43896 1103 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 KATNA1O75449 491 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CEACAM4O75871 244 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 SLITRK5O94991 958 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 TRBC1P01850 177 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 ATP1A1P05023 1023 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PYGLP06737 847 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 ACP5P13686 325 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 SLC2A4P14672 509 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 ZNF30P17039 623 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 POU3F2P20265 443 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 NFKBIAP25963 317 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CASP14P31944 242 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CAPZBP47756 277 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 LEPRP48357 1165 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PPM1FP49593 454 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CLCNKAP51800 687 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PGDP52209 483 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 POLR2FP61218 127 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 MAXP61244 160 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 RPS18P62269 152 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 IL11RAQ14626 422 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 INPP5JQ15735 1006 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 UGT8Q16880 541 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 DPCR1Q3MIW9 517 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 RALGPS1Q5JS13 557 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 HENMT1Q5T8I9 393 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 ARMC12Q5T9G4 340 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 C1QL3Q5VWW1 255 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 TMEM26Q6ZUK4 368 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CHST15Q7LFX5 561 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PLXDC1Q8IUK5 500 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 RSC1A1Q92681 617 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 PLEKHG4BQ96PX9 1271 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 RIOK2Q9BVS4 552 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 AKIRIN1Q9H9L7 192 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 NLRC4Q9NPP4 1024 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 CASS4Q9NQ75 786 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 SAMSN1Q9NSI8 373 aaKnown RBP7.16□□□□□ -1.26
ATXN3-219ENST00000553488 ETNK2Q9NVF9 386 aa7.16□□□□□ -1.26
ATXN3-219ENST00000553488 TAB2Q9NYJ8 693 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms