RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 VASH2Q86V25 355 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CBARPQ8N350 705 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TP53I13Q8NBR0 393 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 GPR26Q8NDV2 337 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CALML6Q8TD86 181 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CDKL2Q92772 493 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 HDAC10Q969S8 669 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CCDC74AQ96AQ1 378 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TBATAQ96M53 351 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PWWP2AQ96N64 755 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 GFM1Q96RP9 751 aaKnown RBP11.23□□□□□ -0.61
TMEM116-218ENST00000552839 FAM167BQ9BTA0 163 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 KIFC1Q9BW19 673 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 SLC13A1Q9BZW2 595 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PHACTR1Q9C0D0 580 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 CATSPERZQ9NTU4 200 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 TXNDC16Q9P2K2 825 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 GULP1Q9UBP9 304 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 RIMKLBQ9ULI2 386 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 PCDHGA4Q9Y5G9 962 aa11.23□□□□□ -0.61
TMEM116-218ENST00000552839 MROH6A6NGR9 719 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 D6RAR5 112 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 F8W8V4 182 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 AGRPO00253 132 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SRP72O76094 671 aaKnown RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SLC25A14O95258 325 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 VAPBO95292 243 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 GOT2P00505 430 aaKnown RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 NTRK1P04629 796 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 TUBBP07437 444 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MYCLP1P12525 358 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 ITIH1P19827 911 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MAGEA3P43357 314 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MAGEA4P43358 317 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 YPEL5P62699 121 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 CYP4F2P78329 520 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 DPTQ07507 201 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 CRYMQ14894 314 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 AGERQ15109 404 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 TRADDQ15628 312 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 CHRNA6Q15825 494 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 ERCC6LQ2NKX8 1250 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 ANKRD20A4Q4UJ75 823 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MANEAQ5SRI9 462 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 LDLRAP1Q5SW96 308 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 HENMT1Q5T8I9 393 aaKnown RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 KIAA0930Q6ICG6 404 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 ZDHHC24Q6UX98 284 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 RFLNAQ6ZTI6 216 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 KCNMB4Q86W47 210 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 GSPT2Q8IYD1 628 aaKnown RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SDR16C5Q8N3Y7 309 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 KYQ8NBH2 561 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 OR4L1Q8NH43 312 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MFSD3Q96ES6 412 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 CDKN2AIPNLQ96HQ2 116 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 C19orf43Q9BQ61 176 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 STRADBQ9C0K7 418 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SLC25A18Q9H1K4 315 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SIRPGQ9P1W8 387 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 NFKBIL1Q9UBC1 381 aaPredicted RBP11.22□□□□□ -0.61
TMEM116-218ENST00000552839 KLQ9UEF7 1012 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 PISDQ9UG56 409 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 SLC2A6Q9UGQ3 507 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
TMEM116-218ENST00000552839 COL12A1Q99715 3063 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 PRAMEF33A0A0G2JMD5 474 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 CCDC162PA2VCL2 907 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 TMX2-CTNND1H3BSU7 103 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 PRAMEF10O60809 474 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ERLIN1O75477 346 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 NDUFS3O75489 264 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 SPAG6O75602 509 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 RPLP0P05388 317 aaKnown RBP11.21□□□□□ -0.61
TMEM116-218ENST00000552839 JMJD7P0C870 316 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 CCKBRP32239 447 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 STX2P32856 288 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ETV5P41161 510 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 KIAA1024LP59773 190 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 CDK3Q00526 305 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 PPARDQ03181 441 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 NFATC2Q13469 925 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 UBAP2LQ14157 1087 aaKnown RBP11.21□□□□□ -0.61
TMEM116-218ENST00000552839 NFATC4Q14934 902 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 CLCA4Q14CN2 919 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 TCEA2Q15560 299 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 GPR33Q49SQ1 333 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 MSS51Q4VC12 460 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 RNF187Q5TA31 235 aaPredicted RBP11.21□□□□□ -0.61
TMEM116-218ENST00000552839 LYPLAL1Q5VWZ2 237 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ENPP7Q6UWV6 458 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ADAMTSL4Q6UY14 1074 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 MACC1Q6ZN28 852 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ZFAND4Q86XD8 727 aa11.21□□□□□ -0.61
TMEM116-218ENST00000552839 ARL10Q8N8L6 244 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms