RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 CLN3Q13286 438 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SEMA5AQ13591 1074 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 PLCL1Q15111 1095 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 PPP1R7Q15435 360 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 TRIP13Q15645 432 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 CLPPQ16740 277 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 TBC1D25Q3MII6 688 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 CCDC38Q502W7 563 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 FASTKD1Q53R41 847 aaKnown RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 LYPLAL1Q5VWZ2 237 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 NKAIN2Q5VXU1 208 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 KCTD11Q693B1 232 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 DENND5AQ6IQ26 1287 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 KLHL35Q6PF15 583 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 DRICH1Q6PGQ1 229 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 NLRP9Q7RTR0 991 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 PRUNE1Q86TP1 453 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SERPINA9Q86WD7 417 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ANKMY2Q8IV38 441 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 REXO1L1PQ8IX06 675 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 CFAP206Q8IYR0 622 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 NXPE1Q8N323 547 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SFRP1Q8N474 314 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 OTUD6BQ8N6M0 293 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 RASGEF1AQ8N9B8 481 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ZNF248Q8NDW4 579 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 DDHD1Q8NEL9 900 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 OR6P1Q8NGX9 317 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 HNRNPLLQ8WVV9 542 aaKnown RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 TMEM159Q96B96 161 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 RTP4Q96DX8 246 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SGF29Q96ES7 293 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 LIN37Q96GY3 246 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 CDKN2AIPNLQ96HQ2 116 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 OSBPL9Q96SU4 736 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 AP1M1Q9BXS5 423 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 EPB41L1Q9H4G0 881 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SARS2Q9NP81 518 aaKnown RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ZNF358Q9NW07 568 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ZDHHC3Q9NYG2 299 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SMARCAL1Q9NZC9 954 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 BFARQ9NZS9 450 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 DKK4Q9UBT3 224 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 SLC23A2Q9UGH3 650 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 KLHL3Q9UH77 587 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ACSL5Q9ULC5 683 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 TTC7AQ9ULT0 858 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 PSMD13Q9UNM6 376 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 LOXL2Q9Y4K0 774 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 PCYT1BQ9Y5K3 369 aaPredicted RBP5.8□□□□□ -1.48
CCDC65-204ENST00000552188 ST14Q9Y5Y6 855 aa5.8□□□□□ -1.48
CCDC65-204ENST00000552188 IGHV1OR21-1A0A087WYE8 117 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 MGAT4DA6NG13 374 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TTLL8A6PVC2 850 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 IFRD1O00458 451 aaPredicted RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 GPR39O43194 453 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 LDB2O43679 373 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 RASSF9O75901 435 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 SUN1O94901 812 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 EML2O95834 649 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 OR56A5P0C7T3 313 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 HGFP14210 728 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TYRP1P17643 537 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TCP1P17987 556 aaKnown RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 PAMP19021 973 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 MPSTP25325 297 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ACRV1P26436 265 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CD1CP29017 333 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CCKBRP32239 447 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 PAFAH1B1P43034 410 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ABCG1P45844 678 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ARL4DP49703 201 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ZNF140P52738 457 aaPredicted RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CTSCP53634 463 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 LIMK2P53671 638 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 EPHA4P54764 986 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ERVPABLB-1P60509 514 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 GNG11P61952 73 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 XIAPP98170 497 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 GPS1Q13098 491 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TRA2AQ13595 282 aaKnown RBP eCLIP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 NFE2L1Q14494 772 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 NR1D2Q14995 579 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TLR1Q15399 786 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 SIX1Q15475 284 aaPredicted RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 SYTL3Q4VX76 610 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 KHDC1Q4VXA5 237 aaKnown RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 PCID2Q5JVF3 399 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TSTD2Q5T7W7 516 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 AGAP9Q5VTM2 703 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ARMC6Q6NXE6 501 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CASC4Q6P4E1 433 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 TMEM71Q6P5X7 295 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 CCDC137Q6PK04 289 aaKnown RBP5.79□□□□□ -1.48
CCDC65-204ENST00000552188 C19orf48Q6RUI8 117 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 AFTPHQ6ULP2 937 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ABRAXAS1Q6UWZ7 409 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 PRICKLE2Q7Z3G6 844 aa5.79□□□□□ -1.48
CCDC65-204ENST00000552188 ZNF438Q7Z4V0 828 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms