RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ARMC12Q5T9G4 340 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 MRPL14Q6P1L8 145 aaKnown RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 ISLR2Q6UXK2 745 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 Q6ZPB1 254 aaPredicted RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 CHERPQ8IWX8 916 aaKnown RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 RXFP2Q8WXD0 754 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 THOC3Q96J01 351 aaKnown RBP13.04□□□□□ -0.32
SNRPF-203ENST00000551316 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 UCK2Q9BZX2 261 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 KLHL25Q9H0H3 589 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 CARD9Q9H257 536 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 HPSEQ9Y251 543 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
SNRPF-203ENST00000551316 FAM90A27PA6NNH2 459 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 H3BMH7 237 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 MTX2O75431 263 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 IGHEP01854 428 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 UGT1A4P22310 534 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
SNRPF-203ENST00000551316 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNRPF-203ENST00000551316 INAQ16352 499 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 C11orf96Q7Z7L8 435 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 ADGRG6Q86SQ4 1221 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 MARVELD2Q8N4S9 558 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 AGAP11Q8TF27 550 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 CA5BP1Q8WTZ4 195 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 FAM172AQ8WUF8 416 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 PSKH2Q96QS6 385 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 CD180Q99467 661 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 LHPPQ9H008 270 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 RMI1Q9H9A7 625 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 GPATCH2LQ9NWQ4 482 aa13.03□□□□□ -0.32
SNRPF-203ENST00000551316 P4HA2O15460 535 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 MTA2O94776 668 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 ZWINTO95229 277 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 PEX11BO96011 259 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 MYL1P05976 194 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 ST6GAL1P15907 406 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 ZNF7P17097 686 aaPredicted RBP13.02□□□□□ -0.33
SNRPF-203ENST00000551316 ITGAXP20702 1163 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 MSX1P28360 303 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 ARG2P78540 354 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 HSF1Q00613 529 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 DSG2Q14126 1118 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 PCOLCEQ15113 449 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 KIRREL2Q6UWL6 708 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 USP45Q70EL2 814 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 NTAN1Q96AB6 310 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 MAGED4Q96JG8 741 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 GPATCH1Q9BRR8 931 aaKnown RBP13.02□□□□□ -0.33
SNRPF-203ENST00000551316 CRACR2AQ9BSW2 395 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 GPAMQ9HCL2 828 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 HRASLS2Q9NWW9 162 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 DHCR7Q9UBM7 475 aaKnown RBP13.02□□□□□ -0.33
SNRPF-203ENST00000551316 PPIL1Q9Y3C6 166 aa13.02□□□□□ -0.33
SNRPF-203ENST00000551316 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
SNRPF-203ENST00000551316 C2CD4BA6NLJ0 364 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CHUKO15111 745 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 PRAMEF2O60811 474 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CTAG2O75638 210 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 TOXO94900 526 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CLDN7O95471 211 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 PVRP15151 417 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 ZNF30P17039 623 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 HOXC12P31275 282 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 SOX11P35716 441 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CASP6P55212 293 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 RBPJQ06330 500 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 MYBPHQ13203 477 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 GALNT3Q14435 633 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CAMK4Q16566 473 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 DEFB110Q30KQ9 67 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 AGAP9Q5VTM2 703 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 FGD2Q7Z6J4 655 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 NLRP8Q86W28 1048 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 SPPL2CQ8IUH8 684 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 PSMF1Q92530 271 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 CENPIQ92674 756 aaPredicted RBP13.01□□□□□ -0.33
SNRPF-203ENST00000551316 PTERQ96BW5 349 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 SP110Q9HB58 689 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 ZFYVE1Q9HBF4 777 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 PSMD13Q9UNM6 376 aa13.01□□□□□ -0.33
SNRPF-203ENST00000551316 TRAV17A0A0B4J275 112 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 OR6C74A6NCV1 312 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 FZD6O60353 706 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 CELA2AP08217 269 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 SLC9A1P19634 815 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 AGXTP21549 392 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 DNASE1P24855 282 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 KRT9P35527 623 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 TMPRSS15P98073 1019 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 LBRQ14739 615 aaKnown RBP13□□□□□ -0.33
SNRPF-203ENST00000551316 RPE65Q16518 533 aa13□□□□□ -0.33
SNRPF-203ENST00000551316 TMTC4Q5T4D3 741 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms