RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 TTC30BQ8N4P2 665 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 AGBL3Q8NEM8 1001 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 Q8NFD4 153 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TSPAN14Q8NG11 270 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 CEP295NLQ96MC4 621 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 SIGLEC11Q96RL6 698 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ACOX2Q99424 681 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 AGAP2Q99490 1192 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 RTN4RQ9BZR6 473 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ANKRD2Q9GZV1 360 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 DNAJC18Q9H819 358 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 TMEM184CQ9NVA4 438 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PAG1Q9NWQ8 432 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 WSB2Q9NYS7 404 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 ZNHIT2Q9UHR6 403 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 FBXW11Q9UKB1 542 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 OTOGLQ3ZCN5 2332 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 SETD2Q9BYW2 2564 aaPredicted RBP5.32□□□□□ -1.56
CPSF6-206ENST00000550987 COL12A1Q99715 3063 aa5.32□□□□□ -1.56
CPSF6-206ENST00000550987 PCNX1Q96RV3 2341 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 TLN1Q9Y490 2541 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PCDH11XQ9BZA7 1347 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PCDH11YQ9BZA8 1340 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 LOC102723996A0A087X1L8 192 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 GPR75-ASB3A0A0A6YYF3 556 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 LINC01548A6NM66 108 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 KDM4EB2RXH2 506 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 J3QKU1 62 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PPP6CO00743 305 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PSMA7O14818 248 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PROP1O75360 226 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 TADA2AO75478 443 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ZWINTO95229 277 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PRB1P04280 392 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 FYNP06241 537 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SP100P23497 879 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 CERS1P27544 350 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 CHATP28329 748 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 HOXD10P28358 340 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DCTDP32321 178 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 METAP2P50579 478 aaKnown RBP eCLIP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 CCR3P51677 355 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ARSEP51690 589 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 GPR143P51810 404 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 KRT83P78385 493 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ECT2LQ008S8 904 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SLC10A2Q12908 348 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 BFSP1Q12934 665 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 GRIK2Q13002 908 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 RRS1Q15050 365 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ASIC2Q16515 512 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SNAPC1Q16533 368 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 MMEL1Q495T6 779 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 KRBOX4Q5JUW0 171 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 RARS2Q5T160 578 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 C6orf163Q5TEZ5 329 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DAB2IPQ5VWQ8 1189 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 METTL2BQ6P1Q9 378 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF782Q6ZMW2 699 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DPPA4Q7L190 304 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 CACNA2D4Q7Z3S7 1137 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SDCCAG8Q86SQ7 713 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 METTL23Q86XA0 190 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SNX32Q86XE0 403 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SFTPA2Q8IWL1 248 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 GALNT16Q8N428 558 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 GUF1Q8N442 669 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SPATA6LQ8N4H0 392 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 BOLLQ8N9W6 283 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 KDM1BQ8NB78 822 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 KIF18AQ8NI77 898 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SETD6Q8TBK2 473 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 HASPINQ8TF76 798 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PTPMT1Q8WUK0 201 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ERGIC1Q969X5 290 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 METTL2AQ96IZ6 378 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 POLDIP3Q9BY77 421 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 UPF3BQ9BZI7 483 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PIGMQ9H3S5 423 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DENND2DQ9H6A0 471 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DDX4Q9NQI0 724 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 SELENONQ9NZV5 590 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 OR14J1Q9UGF5 321 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 TTC7AQ9ULT0 858 aaPredicted RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 ZNF148Q9UQR1 794 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 PAM16Q9Y3D7 125 aa5.31□□□□□ -1.56
CPSF6-206ENST00000550987 DDX60Q8IY21 1712 aaKnown RBP5.31□□□□□ -1.56
CPSF6-206ENST00000550987 MGAMO43451 1857 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 TONSLQ96HA7 1378 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 CPED1A4D0V7 1026 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 A6NNC1 897 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 WDR46O15213 610 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PPIP5K2O43314 1243 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 C1QL1O75973 258 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 RSL1D1O76021 490 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 SLU7O95391 586 aaKnown RBP5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PRKCGP05129 697 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 PROZP22891 400 aa5.3□□□□□ -1.56
CPSF6-206ENST00000550987 GPTP24298 496 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms