RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	SCYL1	Q96KG9	808 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC6A18	Q96N87	628 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	OR2M4	Q96R27	311 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	EBF2	Q9HAK2	575 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZSCAN32	Q9NX65	697 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	SUSD2	Q9UGT4	822 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	ZNHIT2	Q9UHR6	403 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	CA5B	Q9Y2D0	317 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	MED16	Q9Y2X0	877 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLXNB3	Q9ULL4	1909 aa		11.43	□□□□□ -0.58
CNOT2-223	ENST00000550160	PABPN1L	A6NDY0	278 aa	Known RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	MGAT4D	A6NG13	374 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	TMEM202	A6NGA9	273 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRR5-ARHGAP8	B1AHC4	643 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	SGTA	O43765	313 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	TYROBP	O43914	113 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	POP7	O75817	140 aa	Known RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	RASGRP1	O95267	797 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC34A2	O95436	690 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CEACAM5	P06731	702 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	RBP1	P09455	135 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	GNS	P15586	552 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCR7	P32248	378 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	MAPK9	P45984	424 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	DHPS	P49366	369 aa	Predicted RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	BLK	P51451	505 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC18A1	P54219	525 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	IRF9	Q00978	393 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	HSPA14	Q0VDF9	509 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	ANGPT1	Q15389	498 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCDC153	Q494R4	210 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	SH2D5	Q6ZV89	423 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	ARMCX6	Q7L4S7	300 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CLEC14A	Q86T13	490 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CPNE9	Q8IYJ1	553 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	BEND7	Q8N7W2	519 aa	Predicted RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	ANKRD42	Q8N9B4	389 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CCDC63	Q8NA47	563 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	OR2L2	Q8NH16	312 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	GIMAP7	Q8NHV1	300 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	LKAAEAR1	Q8TD35	194 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	NAT14	Q8WUY8	206 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	SKA2	Q8WVK7	121 aa	Predicted RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	LINGO1	Q96FE5	620 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	UBXN10	Q96LJ8	280 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	TIMM29	Q9BSF4	260 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	DERL2	Q9GZP9	239 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CARS2	Q9HA77	564 aa	Known RBP	11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	CYP4F12	Q9HCS2	524 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	TM9SF3	Q9HD45	589 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	PCDHGA2	Q9Y5H1	932 aa		11.42	□□□□□ -0.58
CNOT2-223	ENST00000550160	NCOR1	O75376	2440 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SPTY2D1-AS1	A0A0U1RR47	76 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM86C2P	A6NEL3	165 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PRR33	A8MZF0	331 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	BCAT2	O15382	392 aa	Predicted RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	LILRB5	O75023	590 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SP9	P0CG40	484 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	GNPDA1	P46926	289 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	AFF3	P51826	1226 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	C21orf59	P57076	290 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SRP54	P61011	504 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	ARHGAP8	P85298	464 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PPARD	Q03181	441 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	RPA4	Q13156	261 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	LRP8	Q14114	963 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	ACAP2	Q15057	778 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLA2G4E	Q3MJ16	856 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PYCR3	Q53H96	274 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	HHAT	Q5VTY9	493 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	KDM7A	Q6ZMT4	941 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	NEK10	Q6ZWH5	1172 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	RD3	Q7Z3Z2	195 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	RABEPK	Q7Z6M1	372 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	ADAMTSL2	Q86TH1	951 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PARG	Q86W56	976 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	CENPL	Q8N0S6	344 aa	Predicted RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	OXR1	Q8N573	874 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	TCP10L	Q8TDR4	215 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	EEF1AKMT1	Q8WVE0	214 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SREK1	Q8WXA9	508 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	NELL1	Q92832	810 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	NXNL1	Q96CM4	212 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PDXP	Q96GD0	296 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SCARF2	Q96GP6	870 aa	Predicted RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PDLIM5	Q96HC4	596 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	FOPNL	Q96NB1	174 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	MRPL57	Q9BQC6	102 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	ORAI3	Q9BRQ5	295 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	MRPL46	Q9H2W6	279 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SLC24A3	Q9HC58	644 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	FGF22	Q9HCT0	170 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	GALP	Q9UBC7	116 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	FAM8A1	Q9UBU6	413 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	SUFU	Q9UMX1	484 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	RUVBL2	Q9Y230	463 aa	Known RBP	11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	PLLP	Q9Y342	182 aa		11.41	□□□□□ -0.58
CNOT2-223	ENST00000550160	GPSM3	Q9Y4H4	160 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms