RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 PSMD13Q9UNM6 376 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 AAR2Q9Y312 384 aaKnown RBP13.15□□□□□ -0.3
GCN1-206ENST00000549815 MYO18BQ8IUG5 2567 aa13.15□□□□□ -0.3
GCN1-206ENST00000549815 FLNBO75369 2602 aaKnown RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 PYCARD-AS1I3L0S3 204 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 SLC28A2O43868 658 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 MTHFD1P11586 935 aaKnown RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 NELFEP18615 380 aaKnown RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 F8A1P23610 371 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 ZNF140P52738 457 aaPredicted RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 NFKB2Q00653 900 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 FOXM1Q08050 763 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 IL11RAQ14626 422 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 LONRF2Q1L5Z9 754 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 BCL7AQ4VC05 210 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 CRTC2Q53ET0 693 aaPredicted RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 FNBP1LQ5T0N5 605 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 CACHD1Q5VU97 1274 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 KCTD11Q693B1 232 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 BORAQ6PGQ7 559 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
GCN1-206ENST00000549815 FAM92BQ6ZTR7 304 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 DET1Q7L5Y6 550 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 ESX1Q8N693 406 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 OR2L2Q8NH16 312 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 SLC41A2Q96JW4 573 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 CATSPER2Q96P56 530 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 FERMT1Q9BQL6 677 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 EFHD1Q9BUP0 239 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 ADNPQ9H2P0 1102 aa13.14□□□□□ -0.31
GCN1-206ENST00000549815 IGHV5-51A0A0C4DH38 117 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 A0A0U1RQJ8 604 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 DDX3YO15523 660 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 LDB2O43679 373 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 RASSF9O75901 435 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 TJP3O95049 919 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 OAS2P29728 719 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 AKT1P31749 480 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 NAP1L1P55209 391 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 POLE2P56282 527 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 CDC20Q12834 499 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 KLF1Q13351 362 aaPredicted RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 PRPSAP1Q14558 356 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 IRGCQ6NXR0 463 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 DUS1LQ6P1R4 473 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 MICALCLQ6ZW33 695 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 GAS2L3Q86XJ1 694 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 KIAA1143Q96AT1 154 aaPredicted RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 RNF31Q96EP0 1072 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 TBL1YQ9BQ87 522 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 FAM117AQ9C073 453 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 WWP1Q9H0M0 922 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 SLC25A18Q9H1K4 315 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 MRPS18BQ9Y676 258 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 CFAP20Q9Y6A4 193 aaKnown RBP13.13□□□□□ -0.31
GCN1-206ENST00000549815 RPS6KL1Q9Y6S9 549 aa13.13□□□□□ -0.31
GCN1-206ENST00000549815 KLHL33A6NCF5 533 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 OR5K3A6NET4 321 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 SUV39H1O43463 412 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 SPAG6O75602 509 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 IPO7O95373 1038 aaKnown RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 TIAF1O95411 115 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 METTL18O95568 372 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 CRTAMO95727 393 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 FOLR1P15328 257 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 PBLDP30039 288 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 PRLHRP49683 370 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 TMPRSS15P98073 1019 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 PDE1BQ01064 536 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 KCNAB2Q13303 367 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
GCN1-206ENST00000549815 ZNF658BQ4V348 819 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 CAPRIN2Q6IMN6 1127 aaKnown RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 C6orf15Q6UXA7 325 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 PRICKLE2Q7Z3G6 844 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 SNX20Q7Z614 316 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 NXPE1Q8N323 547 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 LILRA3Q8N6C8 439 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 SPDYE1Q8NFV5 336 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 STARD8Q92502 1023 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 UBXN4Q92575 508 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 RMDN2Q96LZ7 410 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 PPP1R2P1Q96PQ5 205 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 MAP3K3Q99759 626 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 TUBD1Q9UJT1 453 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 AMFRQ9UKV5 643 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
GCN1-206ENST00000549815 PACSIN2Q9UNF0 486 aaPredicted RBP13.12□□□□□ -0.31
GCN1-206ENST00000549815 UBR5O95071 2799 aaPredicted RBP13.11□□□□□ -0.31
GCN1-206ENST00000549815 IGLV3-16A0A075B6K0 115 aa13.11□□□□□ -0.31
GCN1-206ENST00000549815 TRBV5-4A0A0C4DH59 114 aa13.11□□□□□ -0.31
GCN1-206ENST00000549815 H7C0S8 307 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms