RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 CCT6BQ92526 530 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 ATXN7L3BQ96GX2 97 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 TSSK1BQ9BXA7 367 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 SLCO1B3Q9NPD5 702 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 NLGN3Q9NZ94 848 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.74■□□□□ 0.752e-10■□□□□ 9.7
CTDSP2-204ENST00000548823 GGT7Q9UJ14 662 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 MID2Q9UJV3 735 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 EMCNQ9ULC0 261 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 ATXN7L1Q9ULK2 861 aaPredicted RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 ACTL7AQ9Y615 435 aa19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 COL27A1Q8IZC6 1860 aaPredicted RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 TLN1Q9Y490 2541 aaKnown RBP19.74■□□□□ 0.75
CTDSP2-204ENST00000548823 A0A096LPK6 155 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 LY6G6EA0A0G2JKS1 128 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 WDR91A4D1P6 747 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 TTC34A8MYJ7 566 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 PRAMEF26H0Y7S4 382 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 SNAP91O60641 907 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 PRLP01236 227 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 PROCP04070 461 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 C2P06681 752 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 APOA4P06727 396 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 MAT2AP31153 395 aaKnown RBP19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 SLC1A2P43004 574 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC121Q6ZUS5 278 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 FAM131CQ96AQ9 280 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 C7orf26Q96N11 449 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 ADGRE3Q9BY15 652 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 INTS6Q9UL03 887 aaKnown RBP19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 CORO1CQ9ULV4 474 aaPredicted RBP19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 ERVW-1Q9UQF0 538 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 RRP15Q9Y3B9 282 aaKnown RBP19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 ENTPD2Q9Y5L3 495 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 U3KQA8 63 aa19.73■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC78A2IDD5 438 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 PIAS2O75928 621 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 GSRP00390 522 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 SRPRAP08240 638 aaKnown RBP19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 TROVE2P10155 538 aaKnown RBP eCLIP19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 NEFHP12036 1026 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 BGNP21810 368 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 CRABP2P29373 138 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 DRD3P35462 400 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 CORO7P57737 925 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 RHOAP61586 193 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 POU4F1Q01851 419 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 TAF1AQ15573 450 aaPredicted RBP19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 KIF26BQ2KJY2 2108 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 ZNF470Q6ECI4 717 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 USP53Q70EK8 1073 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 TRIM69Q86WT6 500 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 STK40Q8N2I9 435 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 OTUD6BQ8N6M0 293 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 IFI44Q8TCB0 444 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 EXTL1Q92935 676 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 NSMCE3Q96MG7 304 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 C19orf43Q9BQ61 176 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 NLE1Q9NVX2 485 aaPredicted RBP19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 HACD3Q9P035 362 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 TLK1Q9UKI8 766 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 USH1CQ9Y6N9 552 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 MYO9AB2RTY4 2548 aa19.72■□□□□ 0.75
CTDSP2-204ENST00000548823 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 NEMP2A6NFY4 417 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 GOLGA8TH3BQL2 631 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 RNGTTO60942 597 aaKnown RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 PRKCGP05129 697 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 OGNP20774 298 aaKnown RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 RPL26P61254 145 aaKnown RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 PRAMEP78395 509 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 TLE1Q04724 770 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC15Q0P6D6 951 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CTBP1Q13363 440 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 GALNT3Q14435 633 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 USP10Q14694 798 aaKnown RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 SETMARQ53H47 684 aaPredicted RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 TRPM8Q7Z2W7 1104 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CMC1Q7Z7K0 106 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CILP2Q8IUL8 1156 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 DENND6AQ8IWF6 608 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 GBP7Q8N8V2 638 aaPredicted RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CCDC63Q8NA47 563 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 RDH11Q8TC12 318 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 HDAC10Q969S8 669 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 SGF29Q96ES7 293 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 DUSP23Q9BVJ7 150 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 TMEM216Q9P0N5 145 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 SLC39A10Q9ULF5 831 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 RPL26L1Q9UNX3 145 aaKnown RBP19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 CHKBQ9Y259 395 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 LRRK2Q5S007 2527 aa19.71■□□□□ 0.75
CTDSP2-204ENST00000548823 FAM95CA0A1B0GW59 222 aa19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 PLRG1O43660 514 aaKnown RBP19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 FZD6O60353 706 aa19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 THEGLP0DJG4 465 aa19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 ZNF140P52738 457 aaPredicted RBP19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 RAB10P61026 200 aa19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 MPP1Q00013 466 aa19.7■□□□□ 0.74
CTDSP2-204ENST00000548823 APCDD1Q8J025 514 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms