RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 IL2P60568 153 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 PPP2R2AP63151 447 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 BOP1Q14137 746 aaKnown RBP28.28■■■□□ 2.12
BRF1-213ENST00000548421 INSCQ1MX18 579 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 PLEKHS1Q5SXH7 462 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 IQCHQ86VS3 1027 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 DCP2Q8IU60 420 aaKnown RBP28.28■■■□□ 2.12
BRF1-213ENST00000548421 GALNT13Q8IUC8 556 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 C1orf216Q8TAB5 229 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 MOSPD1Q9UJG1 213 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 PRKAB1Q9Y478 270 aa28.28■■■□□ 2.12
BRF1-213ENST00000548421 C17orf113A0A1B0GUU1 675 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 TMEM120BA0PK00 339 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 PRR33A8MZF0 331 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 POP7O75817 140 aaKnown RBP28.27■■■□□ 2.12
BRF1-213ENST00000548421 FUCA1P04066 466 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 APOA4P06727 396 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 DGKAP23743 735 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 PBLDP30039 288 aaPredicted RBP28.27■■■□□ 2.12
BRF1-213ENST00000548421 RGS4P49798 205 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 OVGP1Q12889 678 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 CSHL1Q14406 222 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 FAM83EQ2M2I3 478 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 TSNAXIP1Q2TAA8 658 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 LYSMD4Q5XG99 296 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 NAPRTQ6XQN6 538 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 CDHR3Q6ZTQ4 885 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 OXR1Q8N573 874 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 ASZ1Q8WWH4 475 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 MRPL40Q9NQ50 206 aaKnown RBP28.27■■■□□ 2.12
BRF1-213ENST00000548421 IGSF5Q9NSI5 407 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 KLQ9UEF7 1012 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 A0A1W2PR77 199 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 CBSLP0DN79 551 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 CBSP35520 551 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 DHPSP49366 369 aaPredicted RBP28.27■■■□□ 2.12
BRF1-213ENST00000548421 SLC18A1P54219 525 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 DLG1Q12959 904 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 PLA2G4EQ3MJ16 856 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 PLK5Q496M5 336 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 SYTL3Q4VX76 610 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 AGAP9Q5VTM2 703 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 OR2L2Q8NH16 312 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 OR1E3Q8WZA6 343 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 NXNL1Q96CM4 212 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 LINGO1Q96FE5 620 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 CYP4F12Q9HCS2 524 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 GRID1Q9ULK0 1009 aa28.27■■■□□ 2.12
BRF1-213ENST00000548421 RUVBL2Q9Y230 463 aaKnown RBP28.27■■■□□ 2.12
BRF1-213ENST00000548421 KLHL33A6NCF5 533 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 MGAT4DA6NG13 374 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 EIF3FO00303 357 aaPredicted RBP28.26■■■□□ 2.11
BRF1-213ENST00000548421 TSPAN12O95859 305 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 RPA3P35244 121 aaPredicted RBP28.26■■■□□ 2.11
BRF1-213ENST00000548421 HSPA14Q0VDF9 509 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 GBX1Q14549 363 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 ZNF658BQ4V348 819 aaPredicted RBP28.26■■■□□ 2.11
BRF1-213ENST00000548421 PYCR3Q53H96 274 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 MTERF4Q7Z6M4 381 aaKnown RBP28.26■■■□□ 2.11
BRF1-213ENST00000548421 AMZ2Q86W34 360 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 SPATA6LQ8N4H0 392 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 ZBTB44Q8NCP5 570 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 HM13Q8TCT9 377 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 TCP10LQ8TDR4 215 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 EEF1AKMT1Q8WVE0 214 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 PDXPQ96GD0 296 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 DERL2Q9GZP9 239 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 CARS2Q9HA77 564 aaKnown RBP28.26■■■□□ 2.11
BRF1-213ENST00000548421 ZNF358Q9NW07 568 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 GULP1Q9UBP9 304 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 FAM8A1Q9UBU6 413 aa28.26■■■□□ 2.11
BRF1-213ENST00000548421 SPTY2D1-AS1A0A0U1RR47 76 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 LIN7AO14910 233 aaPredicted RBP28.25■■■□□ 2.11
BRF1-213ENST00000548421 ZWINTO95229 277 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 WNT1P04628 370 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 ENO3P13929 434 aaPredicted RBP28.25■■■□□ 2.11
BRF1-213ENST00000548421 GNPDA1P46926 289 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 KPNA2P52292 529 aaKnown RBP28.25■■■□□ 2.11
BRF1-213ENST00000548421 NUBP1P53384 320 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 ARHGAP8P85298 464 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 ACSBG2Q5FVE4 666 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 LRRC8EQ6NSJ5 796 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 KLC3Q6P597 504 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 CEP68Q76N32 757 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 TMEM159Q96B96 161 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 PDLIM5Q96HC4 596 aaKnown RBP28.25■■■□□ 2.11
BRF1-213ENST00000548421 TIMM29Q9BSF4 260 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 NMRAL1Q9HBL8 299 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 PLLPQ9Y342 182 aa28.25■■■□□ 2.11
BRF1-213ENST00000548421 USP34Q70CQ2 3546 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 TM9SF1O15321 606 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 GPC4O75487 556 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 CD1DP15813 335 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 ITPKAP23677 461 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 SRP54P61011 504 aaKnown RBP28.24■■■□□ 2.11
BRF1-213ENST00000548421 ATP6V0D1P61421 351 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 MPP2Q14168 576 aa28.24■■■□□ 2.11
BRF1-213ENST00000548421 N4BP2L1Q5TBK1 243 aaPredicted RBP28.24■■■□□ 2.11
BRF1-213ENST00000548421 CHST15Q7LFX5 561 aaPredicted RBP28.24■■■□□ 2.11
BRF1-213ENST00000548421 ARFGAP2Q8N6H7 521 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms