RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 DET1Q7L5Y6 550 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 IGDCC3Q8IVU1 814 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 PNPLA1Q8N8W4 532 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 OR2L2Q8NH16 312 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 OR4C6Q8NH72 309 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 SETD7Q8WTS6 366 aaKnown RBP13.62□□□□□ -0.23
TSEN54-203ENST00000545228 TMEM159Q96B96 161 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 SGF29Q96ES7 293 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 CPNE1Q99829 537 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 TMEM168Q9H0V1 697 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 CDC42EP4Q9H3Q1 356 aaKnown RBP13.62□□□□□ -0.23
TSEN54-203ENST00000545228 ANKZF1Q9H8Y5 726 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 PPCSQ9HAB8 311 aa13.62□□□□□ -0.23
TSEN54-203ENST00000545228 APOBEC2Q9Y235 224 aaKnown RBP13.62□□□□□ -0.23
TSEN54-203ENST00000545228 FAM208BQ5VWN6 2430 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KIR2DS5A0A0G2JLQ3 304 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 A0A0G2JNG1 304 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 TCRBV9S1A1TA0A576 114 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 GOLGA8KD6RF30 607 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 GOLGA8TH3BQL2 631 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KIR2DS3K7RE56 304 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 TAF4O00268 1085 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 IFRD1O00458 451 aaPredicted RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 SDC3O75056 442 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 VPS26AO75436 327 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 POP7O75817 140 aaKnown RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ABHD2P08910 425 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 PKMP14618 531 aaKnown RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ECHS1P30084 290 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 SSTR1P30872 391 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 CDKN1CP49918 316 aaPredicted RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 PMS2P54278 862 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 CSE1LP55060 971 aaKnown RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 IL9RQ01113 521 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KIR2DS5Q14953 304 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KHDC1Q4VXA5 237 aaKnown RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 TEDDM1Q5T9Z0 273 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 FAM45BPQ6NSW5 357 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KDM7AQ6ZMT4 941 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 GLRX5Q86SX6 157 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 CTAGE3PQ8IX95 158 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ARL10Q8N8L6 244 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 LRRN4CLQ8ND94 238 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 FAM46DQ8NEK8 389 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 FAM45AQ8TCE6 357 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ASZ1Q8WWH4 475 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ELMO1Q92556 727 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 LPGAT1Q92604 370 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 NAT6Q93015 286 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 VPS39Q96JC1 886 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 DPEP2Q9H4A9 486 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 LRRC4CQ9HCJ2 640 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KLC4Q9NSK0 619 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 TAS2R13Q9NYV9 303 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 MARCH4Q9P2E8 410 aaPredicted RBP13.61□□□□□ -0.23
TSEN54-203ENST00000545228 KLHL42Q9P2K6 505 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 FTSJ1Q9UET6 329 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 PCOLCE2Q9UKZ9 415 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 HEBP2Q9Y5Z4 205 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 IGF2RP11717 2491 aa13.61□□□□□ -0.23
TSEN54-203ENST00000545228 ASPMQ8IZT6 3477 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 PDZK1P1A8MUH7 402 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 EIF3FO00303 357 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 CBFA2T3O75081 653 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 CAPNS1P04632 268 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 RPN2P04844 631 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 CDK4P11802 303 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 PBLDP30039 288 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 SPRP35270 261 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 GP5P40197 560 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 SKIV2L2P42285 1042 aaKnown RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 SLC12A2P55011 1212 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 DAB2P98082 770 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 B4GALNT1Q00973 533 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 CTBP1Q13363 440 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 ERCC6LQ2NKX8 1250 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 PLA2G4EQ3MJ16 856 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 ZNF648Q5T619 568 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 SLC30A9Q6PML9 568 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 WASH2PQ6VEQ5 465 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 CCNI2Q6ZMN8 369 aaPredicted RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 DBX2Q6ZNG2 339 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 OTOAQ7RTW8 1153 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 DENND6AQ8IWF6 608 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 RBM12BQ8IXT5 1001 aaKnown RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 FAM181AQ8N9Y4 354 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 RHBDD1Q8TEB9 315 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 FBF1Q8TES7 1133 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 TSPAN17Q96FV3 270 aa13.6□□□□□ -0.23
TSEN54-203ENST00000545228 WDR83Q9BRX9 315 aaKnown RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 TRIM56Q9BRZ2 755 aaKnown RBP13.6□□□□□ -0.23
TSEN54-203ENST00000545228 BOCQ9BWV1 1114 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms