RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 TSPAN7P41732 249 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 SARNPP82979 210 aaKnown RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 TMPRSS15P98073 1019 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 PLOD1Q02809 727 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 RPA4Q13156 261 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 ITIH4Q14624 930 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 AARS2Q5JTZ9 985 aaKnown RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 AFTPHQ6ULP2 937 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 CERS6Q6ZMG9 384 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 TAS2R42Q7RTR8 314 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 TMPRSS9Q7Z410 1059 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 PPHLN1Q8NEY8 458 aaKnown RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 OR52K1Q8NGK4 314 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 SGF29Q96ES7 293 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 ZDHHC12Q96GR4 267 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 SGSM3Q96HU1 749 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 DDA1Q9BW61 102 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 CASS4Q9NQ75 786 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 ZNF624Q9P2J8 865 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 EPHA6Q9UF33 1036 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 PCDHB11Q9Y5F2 797 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 PCDHGA3Q9Y5H0 932 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 COLEC10Q9Y6Z7 277 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 AHCTF1Q8WYP5 2266 aa11.58□□□□□ -0.56
HDAC4-216ENST00000544989 MN1Q10571 1320 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-216ENST00000544989 PTPRQQ9UMZ3 2332 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 GOLGA6L10A0A0M3HER8 536 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 OR52A4PA6NMU1 304 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 CES2O00748 559 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 GPR39O43194 453 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 KLK10O43240 276 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 LIPCP11150 499 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 HGFP14210 728 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 BRAFP15056 766 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 PBLDP30039 288 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-216ENST00000544989 RPL22P35268 128 aaKnown RBP11.57□□□□□ -0.56
HDAC4-216ENST00000544989 NSG1P42857 185 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 MAPK9P45984 424 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 CAPZBP47756 277 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 MAPK10P53779 464 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 DRG2P55039 364 aaKnown RBP11.57□□□□□ -0.56
HDAC4-216ENST00000544989 BASP1P80723 227 aaKnown RBP11.57□□□□□ -0.56
HDAC4-216ENST00000544989 CFHR1Q03591 330 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 NFE2L1Q14494 772 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 C16orf72Q14CZ0 275 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 RPE65Q16518 533 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 PACS1Q6VY07 963 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 DET1Q7L5Y6 550 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 ARHGAP22Q7Z5H3 698 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 PDZD3Q86UT5 571 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 SERPINA9Q86WD7 417 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 ZNF761Q86XN6 746 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-216ENST00000544989 RASGEF1CQ8N431 466 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 USP7Q93009 1102 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 IL22Q9GZX6 179 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 RAB33BQ9H082 229 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 BFARQ9NZS9 450 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 TCAF1Q9Y4C2 921 aa11.57□□□□□ -0.56
HDAC4-216ENST00000544989 MGAQ8IWI9 3026 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TEX51A0A1B0GUA7 166 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 STMND1H3BQB6 276 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 PGRMC1O00264 195 aaKnown RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 IFRD1O00458 451 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 C9P02748 559 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 FTH1P02794 183 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 MTHFD1P11586 935 aaKnown RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 ITIH1P19827 911 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TPSB2P20231 275 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 ITPKBP27987 946 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 CXCR5P32302 372 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 CD151P48509 253 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 NPY2RP49146 381 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 ATP1A2P50993 1020 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 PRAMEP78395 509 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 ACVR1Q04771 509 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 GPR18Q14330 331 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 GSE1Q14687 1217 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 CLCA4Q14CN2 919 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TPSAB1Q15661 275 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 PCID2Q5JVF3 399 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 DCAF12Q5T6F0 453 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TSTD2Q5T7W7 516 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 CEACAM20Q6UY09 585 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 GPR155Q7Z3F1 870 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 PRSS42Q7Z5A4 293 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 FAM129CQ86XR2 697 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TAB3Q8N5C8 712 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 RCBTB1Q8NDN9 531 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 GRK7Q8WTQ7 553 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 NAF1Q96HR8 494 aaKnown RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 FCRL3Q96P31 734 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 BBC3Q96PG8 261 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 CCNL2Q96S94 520 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TSSK1BQ9BXA7 367 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 TBC1D10AQ9BXI6 508 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 PRORYQ9H606 182 aa11.56□□□□□ -0.56
HDAC4-216ENST00000544989 FBXO8Q9NRD0 319 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms