RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TMEM121BQ9BXQ6 578 aaPredicted RBP18.75■□□□□ 0.59
DDX55-211ENST00000544429 UCK1Q9HA47 277 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 CPNE7Q9UBL6 633 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 ANAPC5Q9UJX4 755 aa18.75■□□□□ 0.59
DDX55-211ENST00000544429 TRBV23OR9-2A0A075B6M9 112 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 MT-CO3P00414 261 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 PGAM1P18669 254 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 OGNP20774 298 aaKnown RBP18.74■□□□□ 0.59
DDX55-211ENST00000544429 RPS3P23396 243 aaKnown RBP eCLIP18.74■□□□□ 0.59
DDX55-211ENST00000544429 PPARGP37231 505 aaPredicted RBP18.74■□□□□ 0.59
DDX55-211ENST00000544429 ADARP55265 1226 aaKnown RBP18.74■□□□□ 0.59
DDX55-211ENST00000544429 CCL7P80098 99 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 CRYMQ14894 314 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 HIF1AQ16665 826 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 DNAJC21Q5F1R6 531 aaKnown RBP18.74■□□□□ 0.59
DDX55-211ENST00000544429 CAPRIN2Q6IMN6 1127 aaKnown RBP18.74■□□□□ 0.59
DDX55-211ENST00000544429 MRNIPQ6NTE8 343 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 NEPROQ6NW34 567 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 SLC9B2Q86UD5 537 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 CILP2Q8IUL8 1156 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 MMGT1Q8N4V1 131 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 LPGAT1Q92604 370 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 LRRN3Q9H3W5 708 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 COG4Q9H9E3 785 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 VPS37BQ9H9H4 285 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 CLCA2Q9UQC9 943 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 MAD1L1Q9Y6D9 718 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 FRYQ5TBA9 3013 aa18.74■□□□□ 0.59
DDX55-211ENST00000544429 OR52A4PA6NMU1 304 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 RHPN2P1A8MT19 583 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 PDZK1P1A8MUH7 402 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 GOLGA8KD6RF30 607 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 GOLGA8TH3BQL2 631 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 PRMT5O14744 637 aaPredicted RBP18.73■□□□□ 0.59
DDX55-211ENST00000544429 TTC4O95801 387 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 POLBP06746 335 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 PBLDP30039 288 aaPredicted RBP18.73■□□□□ 0.59
DDX55-211ENST00000544429 RPA4Q13156 261 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 SEPT7Q16181 437 aaKnown RBP18.73■□□□□ 0.59
DDX55-211ENST00000544429 CLPPQ16740 277 aaPredicted RBP18.73■□□□□ 0.59
DDX55-211ENST00000544429 LONRF1Q17RB8 773 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 STEAP4Q687X5 459 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 CENPUQ71F23 418 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 LRRC6Q86X45 466 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 MARCH9Q86YJ5 346 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 GATA6Q92908 595 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 BIRC8Q96P09 236 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 RAB17Q9H0T7 212 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 ABCG4Q9H172 646 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 OR52A5Q9H2C5 316 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 SLC40A1Q9NP59 571 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 POT1Q9NUX5 634 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 IL1RAPL1Q9NZN1 696 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 FREM2Q5SZK8 3169 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 KIF26BQ2KJY2 2108 aa18.73■□□□□ 0.59
DDX55-211ENST00000544429 IGHV1OR21-1A0A087WYE8 117 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 FAM149AA5PLN7 773 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 LILRA5A6NI73 299 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 D6RAR5 112 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 FTH1P02794 183 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 RPLP0P05388 317 aaKnown RBP18.72■□□□□ 0.59
DDX55-211ENST00000544429 OR56A5P0C7T3 313 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 CD1CP29017 333 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 OR1D5P58170 312 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 TARDBPQ13148 414 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX55-211ENST00000544429 FRG1Q14331 258 aaKnown RBP18.72■□□□□ 0.59
DDX55-211ENST00000544429 RPE65Q16518 533 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 BBS9Q3SYG4 887 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 RNF187Q5TA31 235 aaPredicted RBP18.72■□□□□ 0.59
DDX55-211ENST00000544429 TMPRSS9Q7Z410 1059 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 LMNTD2Q8IXW0 634 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 CFAP206Q8IYR0 622 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX55-211ENST00000544429 ART4Q93070 314 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 SH3KBP1Q96B97 665 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 RMDN2Q96LZ7 410 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 LRRC1Q9BTT6 524 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 DPH5Q9H2P9 285 aa18.72■□□□□ 0.59
DDX55-211ENST00000544429 UTP11Q9Y3A2 253 aaKnown RBP18.72■□□□□ 0.59
DDX55-211ENST00000544429 CHD8Q9HCK8 2581 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 SLC5A10A0PJK1 596 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 LIN7AO14910 233 aaPredicted RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 S1PR4O95977 384 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 MTHFD1P11586 935 aaKnown RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 JUPP14923 745 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 ELK3P41970 407 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 HALP42357 657 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 EPHA4P54764 986 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 ARL4CP56559 192 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 GPLD1P80108 840 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 CFHR1Q03591 330 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 SPIDRQ14159 915 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 TRADDQ15628 312 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 ISXQ2M1V0 245 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 SPANXN3Q5MJ09 141 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 ZDHHC24Q6UX98 284 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 RBM44Q6ZP01 1051 aaKnown RBP18.71■□□□□ 0.59
DDX55-211ENST00000544429 TMEM26Q6ZUK4 368 aa18.71■□□□□ 0.59
DDX55-211ENST00000544429 SDCCAG8Q86SQ7 713 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms