RNA–Protein interactions for RNA: ENST00000544041.5

MAP3K4-215, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 1 (best)

Gene MAP3K4, Length 5,444 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-215	ENST00000544041	ZNF557	Q8N988	423 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	BRSK1	Q8TDC3	778 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ITPKC	Q96DU7	683 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	DMRTB1	Q96MA1	342 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ANKRA2	Q9H9E1	313 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	PFDN2	Q9UHV9	154 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041		A0A1W2PP18	115 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041		H0YAE9	185 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	AP3D1	O14617	1153 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ERN1	O75460	977 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SEMA3D	O95025	777 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ESR1	P03372	595 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ANXA8	P13928	327 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ZNF182	P17025	639 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	NDST2	P52849	883 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	IST1	P53990	364 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	CACNG1	Q06432	222 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SETMAR	Q53H47	684 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SLC39A4	Q6P5W5	647 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FABP12	A6NFH5	140 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TSPAN1	O60635	241 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RGS20	O76081	388 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	DPY19L1	Q2PZI1	675 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FBXO48	Q5FWF7	155 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TPRG1L	Q5T0D9	272 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RASAL3	Q86YV0	1011 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TRAPPC5	Q8IUR0	188 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	MEIOB	Q8N635	442 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ANKRD49	Q8WVL7	239 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	C11orf24	Q96F05	449 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FBXL20	Q96IG2	436 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TCF25	Q9BQ70	676 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	DPEP3	Q9H4B8	488 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	BRD9	Q9H8M2	597 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TRPV5	Q9NQA5	729 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	MIOS	Q9NXC5	875 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	MKLN1	Q9UL63	735 aa		13.53	□□□□□ -0.24
MAP3K4-215	ENST00000544041	CCL22	O00626	93 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	POR	P16435	677 aa	Predicted RBP	13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	HCAR3	P49019	387 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RPS14	P62263	151 aa	Known RBP	13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	MYBPC3	Q14896	1274 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	C6orf183	Q5T699	404 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FAM91A1	Q658Y4	838 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SMYD5	Q6GMV2	418 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SULT1C3	Q6IMI6	304 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FAM117B	Q6P1L5	589 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TAC4	Q86UU9	113 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	C8orf48	Q96LL4	319 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ZNF347	Q96SE7	839 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	NR2E3	Q9Y5X4	410 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	LMO7	Q8WWI1	1683 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041		A0A1W2PQ72	361 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RBM47	A0AV96	593 aa	Known RBP	13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	TOP3B	O95985	862 aa	Known RBP	13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	SLC15A1	P46059	708 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RORC	P51449	518 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	PRR23C	Q6ZRP0	262 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	CYS1	Q717R9	158 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	FAM20C	Q8IXL6	584 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ZBTB2	Q8N680	514 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	CNPPD1	Q9BV87	410 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	ITPA	Q9BY32	194 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	PHF24	Q9UPV7	400 aa		13.52	□□□□□ -0.24
MAP3K4-215	ENST00000544041	RIMBP3C	A6NJZ7	1639 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	RIMBP3B	A6NNM3	1639 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	RIMBP3	Q9UFD9	1639 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	MAGEB17	A8MXT2	336 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	PDHX	O00330	501 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	MSC	O60682	206 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	SNX4	O95219	450 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CTPS1	P17812	591 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	STAR	P49675	285 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	ZNF157	P51786	506 aa	Predicted RBP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	SRSF11	Q05519	484 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CRELD1	Q96HD1	420 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	HBEGF	Q99075	208 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	SLC7A5P2	Q9GIP4	190 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	LOC100130705	A0A1B0GUX0	176 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CLDN11	O75508	207 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	RNASEH2A	O75792	299 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	AHSG	P02765	367 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	AKR1A1	P14550	325 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CXCR3	P49682	368 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	MRPS6	P82932	125 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	PFKP	Q01813	784 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	SYT16	Q17RD7	645 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	ZNF404	Q494X3	552 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CCDC36	Q8IYA8	594 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	LRRC20	Q8TCA0	184 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	HDAC2	Q92769	488 aa	Known RBP	13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	KCNS3	Q9BQ31	491 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	ADAMTS10	Q9H324	1103 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	ZNF224	Q9NZL3	707 aa		13.52	□□□□□ -0.25
MAP3K4-215	ENST00000544041	FBP2	O00757	339 aa		13.51	□□□□□ -0.25
MAP3K4-215	ENST00000544041	CCNB2	O95067	398 aa		13.51	□□□□□ -0.25
MAP3K4-215	ENST00000544041	NPPA	P01160	153 aa		13.51	□□□□□ -0.25
MAP3K4-215	ENST00000544041	DNAJA1	P31689	397 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms