RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 ZNF69Q9UC07 566 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 TRIM17Q9Y577 477 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 NRCAMQ92823 1304 aa15.28■□□□□ 0.04
CHD4-210ENST00000544040 EFCAB9A8MZ26 197 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 H3BNX3 289 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 PIP5K1BO14986 540 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 MTPNP58546 118 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 NOMO1Q15155 1222 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 SLC25A52Q3SY17 297 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 PRAMEF17Q5VTA0 474 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 CES5AQ6NT32 575 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 USP43Q70EL4 1123 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 GAL3ST4Q96RP7 486 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 B3GNT4Q9C0J1 378 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 TCF7L1Q9HCS4 588 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 SQORQ9Y6N5 450 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 NRLP54845 237 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 DGKZQ13574 1117 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 GPR153Q6NV75 609 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 ZNF548Q8NEK5 533 aaPredicted RBP15.27■□□□□ 0.04
CHD4-210ENST00000544040 AGAP2Q99490 1192 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 RAI2Q9Y5P3 530 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 ZNF99A8MXY4 864 aaPredicted RBP15.27■□□□□ 0.04
CHD4-210ENST00000544040 MAFO75444 373 aaPredicted RBP15.27■□□□□ 0.04
CHD4-210ENST00000544040 OR4F21O95013 312 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 PSMD8P48556 350 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 MAPK12P53778 367 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 CD83Q01151 205 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 FAM46CQ5VWP2 391 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 SLC26A9Q7LBE3 791 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 FOXRED2Q8IWF2 684 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 EFHD2Q96C19 240 aaPredicted RBP15.27■□□□□ 0.04
CHD4-210ENST00000544040 CSPG4P5Q96PW8 444 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 TRMOQ9BU70 441 aa15.27■□□□□ 0.04
CHD4-210ENST00000544040 CXCR6O00574 342 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 STBD1O95210 358 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 DSC2Q02487 901 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 ECM1Q16610 540 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 BSNDQ8WZ55 320 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 GOLGA2P5Q9HBQ8 144 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 A0A0G2JPF8 293 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 HNRNPCL3B7ZW38 293 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 OR4Q2P0C623 313 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 HNRNPCL4P0DMR1 293 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 VEGFAP15692 232 aaPredicted RBP15.27■□□□□ 0.03
CHD4-210ENST00000544040 EFR3AQ14156 821 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 SWT1Q5T5J6 900 aaKnown RBP15.27■□□□□ 0.03
CHD4-210ENST00000544040 ANKRD22Q5VYY1 191 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 QSOX2Q6ZRP7 698 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 WRAP53Q9BUR4 548 aaKnown RBP15.27■□□□□ 0.03
CHD4-210ENST00000544040 ZNF350Q9GZX5 532 aa15.27■□□□□ 0.03
CHD4-210ENST00000544040 REXO2Q9Y3B8 237 aaKnown RBP15.27■□□□□ 0.03
CHD4-210ENST00000544040 ABLIM1O14639 778 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 MASP1P48740 699 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RORCP51449 518 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RPL6Q02878 288 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 PSRC1Q6PGN9 363 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 ZDHHC21Q8IVQ6 265 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CFAP206Q8IYR0 622 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 OR4C6Q8NH72 309 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 POP5Q969H6 163 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 ESAMQ96AP7 390 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 KXD1Q9BQD3 176 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 IFT27Q9BW83 186 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 TAS2R7Q9NYW3 318 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 OR1F1O43749 312 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 GADD45GO95257 159 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 GABRR2P28476 465 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 MINDY2Q8NBR6 621 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RFKQ969G6 155 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 HMX1Q9NP08 348 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 UGT2B4P06133 528 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 PUM1Q14671 1186 aaKnown RBP eCLIP15.26■□□□□ 0.034e-7■■□□□ 13.9
CHD4-210ENST00000544040 XYLT1Q86Y38 959 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 MAGEE1Q9HCI5 957 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 KIAA1522Q9P206 1035 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 NR2E1Q9Y466 385 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 OR6C70A6NIJ9 312 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 TTC34A8MYJ7 566 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 WNT10BO00744 389 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 PDPK1O15530 556 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 STK16O75716 305 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RPIAP49247 311 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 RFTN2Q52LD8 501 aaPredicted RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 SPATA22Q8NHS9 363 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 GRPEL2Q8TAA5 225 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 EVA1BQ9NVM1 165 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 MED11Q9P086 117 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 EIF2B4Q9UI10 523 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 RIMKLBQ9ULI2 386 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CCRL2O00421 344 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 MPZL2O60487 215 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 CPNE3O75131 537 aaKnown RBP15.26■□□□□ 0.03
CHD4-210ENST00000544040 FCER2P06734 321 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 DDX6P26196 483 aaKnown RBP eCLIP15.26■□□□□ 0.032e-10■■■■■ 32.8
CHD4-210ENST00000544040 ASMTP46597 345 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 BMT2Q1RMZ1 405 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 TEX44Q53QW1 395 aa15.26■□□□□ 0.03
CHD4-210ENST00000544040 INPP4AQ96PE3 977 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms