RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 GPLD1P80108 840 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 RPA4Q13156 261 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 SEPT7Q16181 437 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 HIF1AQ16665 826 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 DUPD1Q68J44 220 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 RBM44Q6ZP01 1051 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 LRRC6Q86X45 466 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 NAT14Q8WUY8 206 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 FCRL3Q96P31 734 aaPredicted RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 TCF12Q99081 682 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 EBNA1BP2Q99848 306 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 TRIM31Q9BZY9 425 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 COG4Q9H9E3 785 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 WDR37Q9Y2I8 494 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 UTP11Q9Y3A2 253 aaKnown RBP18.03■□□□□ 0.48
COPS7A-216ENST00000543170 PRSS21Q9Y6M0 314 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 UNC13CQ8NB66 2214 aa18.03■□□□□ 0.48
COPS7A-216ENST00000543170 PRMT5O14744 637 aaPredicted RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 OR1I1O60431 355 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 JUPP14923 745 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 RPS3P23396 243 aaKnown RBP eCLIP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 DRG2P55039 364 aaKnown RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 ADARP55265 1226 aaKnown RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 ARL4CP56559 192 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 CLDN6P56747 220 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 CCL7P80098 99 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 CALCOCO2Q13137 446 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 SQSTM1Q13501 440 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 LONRF1Q17RB8 773 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 MSS51Q4VC12 460 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 SDCCAG8Q86SQ7 713 aaPredicted RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 MNS1Q8NEH6 495 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 GFM1Q96RP9 751 aaKnown RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 TRIM56Q9BRZ2 755 aaKnown RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 TSSK1BQ9BXA7 367 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 P2RY12Q9H244 342 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 EPB41L1Q9H4G0 881 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 ZNF624Q9P2J8 865 aaPredicted RBP18.02■□□□□ 0.48
COPS7A-216ENST00000543170 VPS9D1Q9Y2B5 631 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 SNX24Q9Y343 169 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 FAM169AQ9Y6X4 670 aa18.02■□□□□ 0.48
COPS7A-216ENST00000543170 CEP295Q9C0D2 2601 aa18.02■□□□□ 0.47
COPS7A-216ENST00000543170 E7ESA3 106 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 LIN7AO14910 233 aaPredicted RBP18.01■□□□□ 0.47
COPS7A-216ENST00000543170 VIPP01282 170 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 SLC35G4P0C7Q5 338 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 SLC19A1P41440 591 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 PDX1P52945 283 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 PLOD1Q02809 727 aaPredicted RBP18.01■□□□□ 0.47
COPS7A-216ENST00000543170 CAMK2BQ13554 666 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 CRYMQ14894 314 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 CLCA4Q14CN2 919 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 BBS9Q3SYG4 887 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 NEPROQ6NW34 567 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 C8orf74Q6P047 294 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 CILP2Q8IUL8 1156 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 TRIM48Q8IWZ4 208 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 OTUD6BQ8N6M0 293 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 Q8N9G6 341 aaPredicted RBP18.01■□□□□ 0.47
COPS7A-216ENST00000543170 CALML6Q8TD86 181 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 SLC38A3Q99624 504 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 DPYSL5Q9BPU6 564 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 TMEM121BQ9BXQ6 578 aaPredicted RBP18.01■□□□□ 0.47
COPS7A-216ENST00000543170 INTS10Q9NVR2 710 aaKnown RBP18.01■□□□□ 0.47
COPS7A-216ENST00000543170 KCNK4Q9NYG8 393 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 GNPTGQ9UJJ9 305 aa18.01■□□□□ 0.47
COPS7A-216ENST00000543170 TRBV23OR9-2A0A075B6M9 112 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 IGHV1OR21-1A0A087WYE8 117 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 OR52A4PA6NMU1 304 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 B4GAT1O43505 415 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 NDUFS3O75489 264 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 MTHFD1P11586 935 aaKnown RBP18■□□□□ 0.47
COPS7A-216ENST00000543170 MRPS25P82663 173 aaKnown RBP18■□□□□ 0.47
COPS7A-216ENST00000543170 TARDBPQ13148 414 aaKnown RBP eCLIP18■□□□□ 0.47
COPS7A-216ENST00000543170 RPE65Q16518 533 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 ISXQ2M1V0 245 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 SPANXN3Q5MJ09 141 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 CAPRIN2Q6IMN6 1127 aaKnown RBP18■□□□□ 0.47
COPS7A-216ENST00000543170 ZNF449Q6P9G9 518 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 LDB1Q86U70 411 aaPredicted RBP18■□□□□ 0.47
COPS7A-216ENST00000543170 CFAP206Q8IYR0 622 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 LPGAT1Q92604 370 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 GATA6Q92908 595 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 CXorf40BQ96DE9 158 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 FAM167BQ9BTA0 163 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 CARD6Q9BX69 1037 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 PHACTR1Q9C0D0 580 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 WWP1Q9H0M0 922 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 OR52A5Q9H2C5 316 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 SYNDIG1Q9H7V2 258 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 GRHL1Q9NZI5 618 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 PCDHB1Q9Y5F3 818 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 TEX264Q9Y6I9 313 aa18■□□□□ 0.47
COPS7A-216ENST00000543170 FAM149AA5PLN7 773 aa17.99■□□□□ 0.47
COPS7A-216ENST00000543170 GOLGA8KD6RF30 607 aa17.99■□□□□ 0.47
COPS7A-216ENST00000543170 GOLGA8TH3BQL2 631 aa17.99■□□□□ 0.47
COPS7A-216ENST00000543170 TMX2-CTNND1H3BSU7 103 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms