RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 C16orf72Q14CZ0 275 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 C3orf38Q5JPI3 329 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 RNASEH2BQ5TBB1 312 aaKnown RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 DUS1LQ6P1R4 473 aaKnown RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 SYT10Q6XYQ8 523 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 TMEM26Q6ZUK4 368 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 SPNS2Q8IVW8 549 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 MCUQ8NE86 351 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 PPHLN1Q8NEY8 458 aaKnown RBP9.53□□□□□ -0.88
YBX3-212ENST00000542002 GPR150Q8NGU9 434 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 NCSTNQ92542 709 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 SIGLEC10Q96LC7 697 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 PWWP2AQ96N64 755 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 SERPINB12Q96P63 405 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 CCM2Q9BSQ5 444 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 UCK1Q9HA47 277 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 EPB41L5Q9HCM4 733 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 ASCL3Q9NQ33 180 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 IL1RAPL1Q9NZN1 696 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 BFARQ9NZS9 450 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 PDP2Q9P2J9 529 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 SOX13Q9UN79 622 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 CFAP47Q6ZTR5 3102 aa9.53□□□□□ -0.88
YBX3-212ENST00000542002 MYLKQ15746 1914 aa9.52□□□□□ -0.88
YBX3-212ENST00000542002 GOLGA6L10A0A0M3HER8 536 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 C17orf113A0A1B0GUU1 675 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 SDR42E2A6NKP2 422 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 CD3EAPO15446 510 aaKnown RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 BANF1O75531 89 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 DXOO77932 396 aaKnown RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 TNFSF15O95150 251 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 VAPBO95292 243 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 VIPP01282 170 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 RALBP11234 206 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 MLNP12872 115 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 CCL4P13236 92 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 TYRP1P17643 537 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 VCLP18206 1134 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 ITIH1P19827 911 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 ETV5P41161 510 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 NSG1P42857 185 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 MAPK9P45984 424 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PREPP48147 710 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 LIMK2P53671 638 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 ETF1P62495 437 aaKnown RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 GPLD1P80108 840 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 LAMB3Q13751 1172 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PTK6Q13882 451 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PPP1R7Q15435 360 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PHF19Q5T6S3 580 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 TMEM71Q6P5X7 295 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 FOXR1Q6PIV2 292 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 WDR74Q6RFH5 385 aaPredicted RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 AFTPHQ6ULP2 937 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PACS1Q6VY07 963 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 RAB11FIP2Q7L804 512 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 IGDCC3Q8IVU1 814 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PHC3Q8NDX5 983 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 OR4D9Q8NGE8 314 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 LKAAEAR1Q8TD35 194 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 HEXDCQ8WVB3 486 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PEX13Q92968 403 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 GRAMD1AQ96CP6 724 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 LIN37Q96GY3 246 aaPredicted RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 CCDC74BQ96LY2 380 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 RMDN2Q96LZ7 410 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 TMEM74Q96NL1 305 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 OR52A5Q9H2C5 316 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PLAC1Q9HBJ0 212 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 MRM3Q9HC36 420 aaKnown RBP9.52□□□□□ -0.89
YBX3-212ENST00000542002 ACSL5Q9ULC5 683 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 PCDHGA8Q9Y5G5 932 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 KNTC1P50748 2209 aa9.52□□□□□ -0.89
YBX3-212ENST00000542002 TPRP12270 2363 aaKnown RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 CCDC187A0A096LP49 1063 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 ZCWPW2A0A1B0GU75 182 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 LILRA5A6NI73 299 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 A8MU76 341 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 CDRT15L2A8MXV6 281 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 CFAP99D6REC4 459 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 AP3B1O00203 1094 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 DNALI1O14645 258 aaPredicted RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 PLD2O14939 933 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 TTI1O43156 1089 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 KIF1CO43896 1103 aaKnown RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 KRT37O76014 449 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 UBXN7O94888 489 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 AP2A2O94973 939 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 TPBGLP0DKB5 382 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 THRAP10827 490 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 FGF3P11487 239 aaPredicted RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 MTHFD1P11586 935 aaKnown RBP9.51□□□□□ -0.89
YBX3-212ENST00000542002 SLC2A4P14672 509 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 ITGB6P18564 788 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 CASQ1P31415 396 aa9.51□□□□□ -0.89
YBX3-212ENST00000542002 CCR7P32248 378 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms