RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 IMP3Q9NV31 184 aaKnown RBP15.11■□□□□ 0.01
CLSTN3-213ENST00000541953 RP1L1Q8IWN7 2480 aaPredicted RBP15.11■□□□□ 0.01
CLSTN3-213ENST00000541953 CENPEQ02224 2701 aa15.11■□□□□ 0.01
CLSTN3-213ENST00000541953 CSMD1Q96PZ7 3565 aa15.11■□□□□ 0.01
CLSTN3-213ENST00000541953 FER1L5A0AVI2 2057 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 C21orf140B9A014 251 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 SGTAO43765 313 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 SORBS2O94875 1100 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 LCA5LO95447 670 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 MTHFD1P11586 935 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 PTPN4P29074 926 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 KPNA2P52292 529 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 ABRQ12979 859 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 OLIG2Q13516 323 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 GTF2H3Q13889 308 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 PLCL1Q15111 1095 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 UGT8Q16880 541 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 DNTTIP2Q5QJE6 756 aaKnown RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 ZNF517Q6ZMY9 492 aaPredicted RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 ATCAYQ86WG3 371 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 D2HGDHQ8N465 521 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 Q8NA96 180 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 DDHD1Q8NEL9 900 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 CPT1CQ8TCG5 803 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 ADAMTS17Q8TE56 1095 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 UBXN4Q92575 508 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 ZNF501Q96CX3 271 aaPredicted RBP15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 CHP1Q99653 195 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 GORASP1Q9BQQ3 440 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 WWP1Q9H0M0 922 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 GOLPH3Q9H4A6 298 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 PDE7BQ9NP56 450 aa15.1■□□□□ 0.01
CLSTN3-213ENST00000541953 HIVEP3Q5T1R4 2406 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 TLCD2A6NGC4 264 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 TTLL8A6PVC2 850 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 SPAM1P38567 509 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 HALP42357 657 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 CDKN2BP42772 138 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 CCL11P51671 97 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 C4orf17Q53FE4 359 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 FNBP1LQ5T0N5 605 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 DAAM2Q86T65 1068 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 BLOC1S5Q8TDH9 187 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 HAUS1Q96CS2 278 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 RMDN2Q96LZ7 410 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 TLR10Q9BXR5 811 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 XPO4Q9C0E2 1151 aaKnown RBP15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 CHST8Q9H2A9 424 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 C10orf88Q9H8K7 445 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 MLXIPLQ9NP71 852 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 HRASLS2Q9NWW9 162 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 FAM153AQ9UHL3 310 aa15.09■□□□□ 0.01
CLSTN3-213ENST00000541953 MYO9AB2RTY4 2548 aa15.08■□□□□ 0.01
CLSTN3-213ENST00000541953 GLYATL1P3A0A0U1RQE8 302 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 OR6C74A6NCV1 312 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 CPNE3O75131 537 aaKnown RBP15.08■□□□□ 0
CLSTN3-213ENST00000541953 SCRG1O75711 98 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 RECKO95980 971 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 MT-ND3P03897 115 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 CAPN1P07384 714 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 VCLP18206 1134 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 MARCKSL1P49006 195 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 SLC1A5Q15758 541 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 PPP2R5EQ16537 467 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 TAZQ16635 292 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 ZNF789Q5FWF6 425 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 METRNLQ641Q3 311 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 VSIG1Q86XK7 387 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 TMEM151BQ8IW70 566 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 ZNF567Q8N184 647 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 IPMKQ8NFU5 416 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 MR1Q95460 341 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 DNAJC7Q99615 494 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 SLC25A23Q9BV35 468 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 ING2Q9H160 280 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 LRRC4CQ9HCJ2 640 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 PLEKHB1Q9UF11 243 aaPredicted RBP15.08■□□□□ 0
CLSTN3-213ENST00000541953 SLC24A2Q9UI40 661 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 ARL5AQ9Y689 179 aa15.08■□□□□ 0
CLSTN3-213ENST00000541953 LRBAP50851 2863 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 UBA6A0AVT1 1052 aaPredicted RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 PGDP52209 483 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 ITGA1P56199 1179 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 TUBB4BP68371 445 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 HSD11B2P80365 405 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 ACY1Q03154 408 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 MRPL49Q13405 166 aaKnown RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 TUBB2AQ13885 445 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 PLEKHS1Q5SXH7 462 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 PAPD7Q5XG87 772 aaKnown RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 KAZNQ674X7 775 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 FAM198BQ6UWH4 519 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 GLT6D1Q7Z4J2 308 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 SYVN1Q86TM6 617 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 ZC3H18Q86VM9 953 aaKnown RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 TMEM126BQ8IUX1 230 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 ENDOVQ8N8Q3 282 aaKnown RBP15.07■□□□□ 0
CLSTN3-213ENST00000541953 BRSK1Q8TDC3 778 aa15.07■□□□□ 0
CLSTN3-213ENST00000541953 C12orf66Q96MD2 445 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms