RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 PIM1P11309 404 aaPredicted RBP9.19□□□□□ -0.94
YBX3-211ENST00000541351 DESP17661 470 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 CDH3P22223 829 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PEX19P40855 299 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 RGRP47804 291 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 GABRB2P47870 512 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 EPHB1P54762 984 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 BPIFB4P59827 614 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 AP2B1P63010 937 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 CACNG1Q06432 222 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 CDO1Q16878 200 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 SHEQ5VZ18 495 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 TMEM211Q6ICI0 200 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 SLFN11Q7Z7L1 901 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 LRRTM4Q86VH4 590 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PAQR7Q86WK9 346 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 CATSPER1Q8NEC5 780 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 LMO3Q8TAP4 145 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 DENND1AQ8TEH3 1009 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 NRGNQ92686 78 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 HAS2Q92819 552 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 SNX21Q969T3 373 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PSKH2Q96QS6 385 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 RIOK2Q9BVS4 552 aaKnown RBP9.19□□□□□ -0.94
YBX3-211ENST00000541351 C1GALT1Q9NS00 363 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 SCHIP1Q9P0W5 487 aaPredicted RBP9.19□□□□□ -0.94
YBX3-211ENST00000541351 PPT2Q9UMR5 302 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 PLEKHA6Q9Y2H5 1048 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 ZNF835Q9Y2P0 537 aa9.19□□□□□ -0.94
YBX3-211ENST00000541351 RGSL1A5PLK6 1076 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 OR52A4PA6NMU1 304 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 FAM72CH0Y354 149 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 J3KR12 359 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 SLCO2B1O94956 709 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 F12P00748 615 aaPredicted RBP9.18□□□□□ -0.94
YBX3-211ENST00000541351 ZNF7P17097 686 aaPredicted RBP9.18□□□□□ -0.94
YBX3-211ENST00000541351 SYT1P21579 422 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 RPL10P27635 214 aaKnown RBP9.18□□□□□ -0.94
YBX3-211ENST00000541351 MSX1P28360 303 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 AIF1P55008 147 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 PPP1CAP62136 330 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 CDSNQ15517 529 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 PRAMEF17Q5VTA0 474 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 RHBDD2Q6NTF9 364 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 CERS6Q6ZMG9 384 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 FAM72BQ86X60 149 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 CCHCR1Q8TD31 782 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 NSMCE1Q8WV22 266 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 ZNF599Q96NL3 588 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 CLEC4MQ9H2X3 399 aaPredicted RBP9.18□□□□□ -0.94
YBX3-211ENST00000541351 TRIM39Q9HCM9 518 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 RMND1Q9NWS8 449 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 PKD2L2Q9NZM6 624 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 NXT1Q9UKK6 140 aaKnown RBP9.18□□□□□ -0.94
YBX3-211ENST00000541351 NEU3Q9UQ49 428 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 DNAJC16Q9Y2G8 782 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 PPIL1Q9Y3C6 166 aa9.18□□□□□ -0.94
YBX3-211ENST00000541351 PCM1Q15154 2024 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 GSAPA4D1B5 854 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 GOLGA8SH3BPF8 625 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 SOCS6O14544 535 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 SLC25A14O95258 325 aaPredicted RBP9.17□□□□□ -0.94
YBX3-211ENST00000541351 PGLSO95336 258 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 LY6G6DO95868 133 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 RAF1P04049 648 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 CA4P22748 312 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 MST1P26927 711 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 CHRNB4P30926 498 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 STC1P52823 247 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 PTSQ03393 145 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 IL10RBQ08334 325 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 KEAP1Q14145 624 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 DEFB113Q30KQ7 82 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 ZNF569Q5MCW4 686 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 ZNF385CQ66K41 422 aaPredicted RBP9.17□□□□□ -0.94
YBX3-211ENST00000541351 TTI2Q6NXR4 508 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 PODNL1Q6PEZ8 512 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 TSPAN33Q86UF1 283 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 HOOK3Q86VS8 718 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 WFDC11Q8NEX6 87 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 OR1L3Q8NH93 324 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 AGAP11Q8TF27 550 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 CEP63Q96MT8 703 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 GPR137Q96N19 417 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 NUDCD1Q96RS6 583 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 SARGQ9BW04 601 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 OR2AG1Q9H205 316 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 FAM83DQ9H4H8 585 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 LRRC19Q9H756 370 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 ACP6Q9NPH0 428 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 HAUS2Q9NVX0 235 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 KIAA1468Q9P260 1216 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 ATXN10Q9UBB4 475 aa9.17□□□□□ -0.94
YBX3-211ENST00000541351 CTAG2O75638 210 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 ALBP02768 609 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 NEFLP07196 543 aa9.16□□□□□ -0.94
YBX3-211ENST00000541351 ZNF8P17098 575 aaPredicted RBP9.16□□□□□ -0.94
YBX3-211ENST00000541351 RFC1P35251 1148 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms