RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 PTPN1P18031 435 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 TCN1P20061 433 aaPredicted RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 FNTBP49356 437 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 ALDH3A2P51648 485 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SLC7A2P52569 658 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 HNRNPFP52597 415 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 RPS3AP61247 264 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 MVKQ03426 396 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 MAPRE1Q15691 268 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 CRY1Q16526 586 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 BCL2A1Q16548 175 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 FAM98BQ52LJ0 330 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 GPR107Q5VW38 600 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TPGS2Q68CL5 300 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 ANKRD26P1Q6NSI1 321 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 PAOXQ6QHF9 649 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 LARP4Q71RC2 724 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHFR-219ENST00000541341 THAP5Q7Z6K1 395 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 ACOT1Q86TX2 421 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 LACC1Q8IV20 430 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TCEAL8Q8IYN2 117 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 DCP1BQ8IZD4 617 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 ELMOD1Q8N336 334 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TMEM151AQ8N4L1 468 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SVOPQ8N4V2 548 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TTC9BQ8N6N2 239 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TMCO5AQ8N6Q1 288 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 PCDH20Q8N6Y1 951 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 ZBTB44Q8NCP5 570 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 B3GALNT2Q8NCR0 500 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 OR52E4Q8NGH9 312 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 RHEBL1Q8TAI7 183 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SHKBP1Q8TBC3 707 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 C2orf15Q8WU43 125 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 CANT1Q8WVQ1 401 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SLCO4A1Q96BD0 722 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 ELMO2Q96JJ3 720 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SLC2A13Q96QE2 648 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 TMEM209Q96SK2 561 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 DUSP16Q9BY84 665 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SEMA6AQ9H2E6 1030 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 DPEP3Q9H4B8 488 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 EHD1Q9H4M9 534 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 CATSPERBQ9H7T0 1116 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 SP140LQ9H930 580 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 CRTAC1Q9NQ79 661 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 CNGB3Q9NQW8 809 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 PRMT8Q9NR22 394 aaPredicted RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 C2orf42Q9NWW7 574 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 CCDC167Q9P0B6 97 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 GMEB2Q9UKD1 530 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 AURKCQ9UQB9 309 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 VPS9D1Q9Y2B5 631 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 MRPS17Q9Y2R5 130 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 TCAF1Q9Y4C2 921 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 HELZP42694 1942 aaKnown RBP10.28□□□□□ -0.76
CHFR-219ENST00000541341 LAMA1P25391 3075 aa10.28□□□□□ -0.76
CHFR-219ENST00000541341 A0A0J9YYE9 177 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 A0A1W2PP18 115 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CCDC78A2IDD5 438 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SYCE1LA8MT33 242 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TK2O00142 265 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ZNF197O14709 1029 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 SLC7A4O43246 635 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 LILRB5O75023 590 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TIPRLO75663 272 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 VNN2O95498 520 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TOP3BO95985 862 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 POU2F2P09086 479 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CDH1P12830 882 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 POLR2EP19388 210 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 NFKB1P19838 968 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 EEF1B2P24534 225 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 VARSP26640 1264 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 DPP6P42658 865 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 STT3AP46977 705 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 LEPRP48357 1165 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 KPNA1P52294 538 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 RAD23AP54725 363 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TPD52P55327 224 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 HERVK_113P63132 956 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TUBA1BP68363 451 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 CRADDP78560 199 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ADARB1P78563 741 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 TSPY1Q01534 308 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TRAF2Q12933 501 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 DUSP4Q13115 394 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 GAS6Q14393 721 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ACOX1Q15067 660 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 NFE2Q16621 373 aaPredicted RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 TECRLQ5HYJ1 363 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 ZC3H12BQ5HYM0 836 aaKnown RBP10.27□□□□□ -0.77
CHFR-219ENST00000541341 C6orf10Q5SRN2 563 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 DEPDC1Q5TB30 811 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 AGAP7PQ5VUJ5 663 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TXNDC11Q6PKC3 985 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 Q6ZS52 159 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 GK5Q6ZS86 529 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 TUBA1AQ71U36 451 aa10.27□□□□□ -0.77
CHFR-219ENST00000541341 LRRTM3Q86VH5 581 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms