RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 GPR21Q99679 349 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CCM2Q9BSQ5 444 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ZCCHC2Q9C0B9 1178 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 CCDC68Q9H2F9 335 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PPCSQ9HAB8 311 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 TMBIM4Q9HC24 238 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CYP4F12Q9HCS2 524 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 SARS2Q9NP81 518 aaKnown RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 GULP1Q9UBP9 304 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 FAM8A1Q9UBU6 413 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 KLQ9UEF7 1012 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ZNHIT2Q9UHR6 403 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 GNPTGQ9UJJ9 305 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 CORO1CQ9ULV4 474 aaPredicted RBP9.19□□□□□ -0.94
DDX55-208ENST00000541259 PCDHB1Q9Y5F3 818 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 ST14Q9Y5Y6 855 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 LAMA1P25391 3075 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 PCDH15Q96QU1 1955 aa9.19□□□□□ -0.94
DDX55-208ENST00000541259 IQANK1A0A1B0GTG1 560 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 A0A1B0GTW7 788 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 PATE3B3GLJ2 98 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 GOLGA8RI6L899 631 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 DLL1O00548 723 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 TNFRSF10CO14798 259 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 VILLO15195 856 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 RGS16O15492 202 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 RFPL1O75677 317 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 POP7O75817 140 aaKnown RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 KRT37O76014 449 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 WISP3O95389 354 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 SYF2O95926 243 aaKnown RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 CREB1P16220 341 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 KRT15P19012 456 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 KELP23276 732 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 CNTFP26441 200 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 AOAHP28039 575 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 HTR1BP28222 390 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 PRLHRP49683 370 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 CSRP3P50461 194 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 AFF3P51826 1226 aaKnown RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 IRF9Q00978 393 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 POU4F1Q01851 419 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 GOLGA4Q13439 2230 aaKnown RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 PCM1Q15154 2024 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 LINC01559Q495D7 138 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 ZNF658BQ4V348 819 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 BCL7AQ4VC05 210 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 TNFAIP8L3Q5GJ75 292 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 LGSNQ5TDP6 509 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 PEAR1Q5VY43 1037 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 GPR179Q6PRD1 2367 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 PAQR3Q6TCH7 311 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 TIFABQ6ZNK6 161 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 FAM83HQ6ZRV2 1179 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 CHST15Q7LFX5 561 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 LRRTM4Q86VH4 590 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 IQCHQ86VS3 1027 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 HID1Q8IV36 788 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 RIBC1Q8N443 379 aaPredicted RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 CD200R1Q8TD46 325 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 SH3GL2Q99962 352 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
DDX55-208ENST00000541259 FSCN3Q9NQT6 498 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 SNX15Q9NRS6 342 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 GPR34Q9UPC5 381 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 COMMD10Q9Y6G5 202 aa9.18□□□□□ -0.94
DDX55-208ENST00000541259 E5RI56 91 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 H3BMM5 538 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 KMOO15229 486 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 VPS26AO75436 327 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 TOP3BO95985 862 aaKnown RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 FTH1P02794 183 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 MT-ND3P03897 115 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 C2P06681 752 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 MYZAPP0CAP1 466 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SLC35E2BP0CK96 405 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ACP5P13686 325 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 STMN1P16949 149 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 TYK2P29597 1187 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 MAGEA12P43365 314 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 RPIAP49247 311 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SERPINB8P50452 374 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SLC12A2P55011 1212 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 NXPH1P58417 271 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 RAB10P61026 200 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ARHGAP8P85298 464 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 PPARDQ03181 441 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 DLG1Q12959 904 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 PTK2BQ14289 1009 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 NFE2L1Q14494 772 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ZKSCAN8Q15776 578 aaPredicted RBP9.17□□□□□ -0.94
DDX55-208ENST00000541259 CCDC6Q16204 474 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 KIF19Q2TAC6 998 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 TTMPQ5BVD1 217 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 ACSBG2Q5FVE4 666 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 SH2D5Q6ZV89 423 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 RAPH1Q70E73 1250 aa9.17□□□□□ -0.94
DDX55-208ENST00000541259 TAOK1Q7L7X3 1001 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms