RNA–Protein interactions for RNA: ENST00000540977.1

RFXANK-208, Transcript of regulatory factor X associated ankyrin containing protein, human

TSL 2

Gene RFXANK, Length 389 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFXANK-208	ENST00000540977	GTF2H3	Q13889	308 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	LRRC14	Q15048	493 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	FAM83E	Q2M2I3	478 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	TYSND1	Q2T9J0	566 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	AGAP9	Q5VTM2	703 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	CNST	Q6PJW8	725 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	KYAT3	Q6YP21	454 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	LDB1	Q86U70	411 aa	Predicted RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	IQCH	Q86VS3	1027 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	ZSWIM9	Q86XI8	627 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	RAVER1	Q8IY67	606 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	NRSN1	Q8IZ57	195 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	BANP	Q8N9N5	519 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	SNIP1	Q8TAD8	396 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	SAP25	Q8TEE9	199 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	ARRDC3	Q96B67	414 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	CENPT	Q96BT3	561 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	NUS1	Q96E22	293 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	CNDP2	Q96KP4	475 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	BBC3	Q96PG8	261 aa	Predicted RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	SMIM14	Q96QK8	99 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	PANX3	Q96QZ0	392 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	NDN	Q99608	321 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	COPS8	Q99627	209 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	ZSCAN5A	Q9BUG6	496 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	WRAP53	Q9BUR4	548 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	C1QTNF7	Q9BXJ2	289 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	HDAC8	Q9BY41	377 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	MLXIPL	Q9NP71	852 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	MKS1	Q9NXB0	559 aa		11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	TRMT6	Q9UJA5	497 aa	Known RBP	11.11	□□□□□ -0.63
RFXANK-208	ENST00000540977	FOXO6	A8MYZ6	492 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	QSOX1	O00391	747 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	PRMT5	O14744	637 aa	Predicted RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	MID1	O15344	667 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	TSPAN6	O43657	245 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	RFPL1	O75677	317 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	RNASEH2A	O75792	299 aa	Known RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	S1PR4	O95977	384 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	C1QA	P02745	245 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	ESR1	P03372	595 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	C2	P06681	752 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	OR56A5	P0C7T3	313 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	PKM	P14618	531 aa	Known RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	TAC1	P20366	129 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	MSH3	P20585	1137 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CRHR1	P34998	444 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	RPA3	P35244	121 aa	Predicted RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	MMP12	P39900	470 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	GPR1	P46091	355 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	DCDC1	P59894	354 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	NFATC2	Q13469	925 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	ITIH4	Q14624	930 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CHRNA6	Q15825	494 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	TTLL9	Q3SXZ7	439 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	TTC19	Q6DKK2	380 aa	Predicted RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	RAET1G	Q6H3X3	334 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CPLX4	Q7Z7G2	160 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CMC1	Q7Z7K0	106 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	SERPINA9	Q86WD7	417 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	TRAM1L1	Q8N609	369 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	MZB1	Q8WU39	189 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	SLC39A7	Q92504	469 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	AP2M1	Q96CW1	435 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	FAM111A	Q96PZ2	611 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	FAM129B	Q96TA1	746 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	PRORY	Q9H606	182 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CAB39L	Q9H9S4	337 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	POPDC3	Q9HBV1	291 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	SARS2	Q9NP81	518 aa	Known RBP	11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	AASDHPPT	Q9NRN7	309 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CD84	Q9UIB8	345 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	DMTF1	Q9Y222	760 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	ASXL3	Q9C0F0	2248 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977	CELSR3	Q9NYQ7	3312 aa		11.1	□□□□□ -0.63
RFXANK-208	ENST00000540977		A0A1W2PP55	124 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	WDR91	A4D1P6	747 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	FAM149A	A5PLN7	773 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	C10orf142	B7Z368	130 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	PLK4	O00444	970 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	PHGDH	O43175	533 aa	Known RBP	11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	TM7SF2	O76062	418 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	ALDOA	P04075	364 aa	Known RBP	11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	LTA4H	P09960	611 aa	Known RBP	11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	CREB1	P16220	341 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	LHCGR	P22888	699 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	PSMA3	P25788	255 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	ACRV1	P26436	265 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	EPHA8	P29322	1005 aa	Predicted RBP	11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	ALDH3A1	P30838	453 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	SKIV2L2	P42285	1042 aa	Known RBP	11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	NSG1	P42857	185 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	ACADVL	P49748	655 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	RGS4	P49798	205 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	LIG3	P49916	1009 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	E2F1	Q01094	437 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	PTS	Q03393	145 aa		11.09	□□□□□ -0.63
RFXANK-208	ENST00000540977	CNTN1	Q12860	1018 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms